RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 ZNF322Q6U7Q0 402 aaPredicted RBP11.4□□□□□ -0.58
CPSF7-218ENST00000537641 PARS2Q7L3T8 475 aaKnown RBP11.4□□□□□ -0.58
CPSF7-218ENST00000537641 LHFPL3Q86UP9 236 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 AMIGO1Q86WK6 493 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 LRRC17Q8N6Y2 441 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 ANKRD53Q8N9V6 530 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 TP53I13Q8NBR0 393 aaPredicted RBP11.4□□□□□ -0.58
CPSF7-218ENST00000537641 OR5D16Q8NGK9 328 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 POF1BQ8WVV4 589 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 MYLIPQ8WY64 445 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 SCMH1Q96GD3 660 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 IL17FQ96PD4 163 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 GFM1Q96RP9 751 aaKnown RBP11.4□□□□□ -0.58
CPSF7-218ENST00000537641 SECISBP2Q96T21 854 aaKnown RBP11.4□□□□□ -0.58
CPSF7-218ENST00000537641 WACQ9BTA9 647 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 HDHD5Q9BXW7 423 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.4□□□□□ -0.588e-9■■□□□ 12.1
CPSF7-218ENST00000537641 MED28Q9H204 178 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 OR2AG1Q9H205 316 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 LHX9Q9NQ69 397 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 EIF3KQ9UBQ5 218 aaKnown RBP11.4□□□□□ -0.58
CPSF7-218ENST00000537641 KCNN3Q9UGI6 736 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 ITM2BQ9Y287 266 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 LRRK1Q38SD2 2015 aa11.4□□□□□ -0.58
CPSF7-218ENST00000537641 ZSCAN5BA6NJL1 495 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 CD8B2A6NJW9 211 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 B8ZZF3 427 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 SMLR1H3BR10 107 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 GTPBP1O00178 669 aaKnown RBP11.39□□□□□ -0.59
CPSF7-218ENST00000537641 RNF13O43567 381 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 VEGFDO43915 354 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 TMPRSS11DO60235 418 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 POP7O75817 140 aaKnown RBP11.39□□□□□ -0.59
CPSF7-218ENST00000537641 PAPLNO95428 1278 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 CD8BP10966 210 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 SYN1P17600 705 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 CD53P19397 219 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 CELP19835 753 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 STOMP27105 288 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 OMPP47874 163 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 RNF144AP50876 292 aaPredicted RBP11.39□□□□□ -0.59
CPSF7-218ENST00000537641 CCR8P51685 355 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 ARFIP1P53367 373 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 CTBP2P56545 445 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 PER3P56645 1201 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 FUT5Q11128 374 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 RPA4Q13156 261 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 TRAM1Q15629 374 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 WDR45BQ5MNZ6 344 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 CD276Q5ZPR3 534 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 TMEM91Q6ZNR0 172 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 IDO2Q6ZQW0 420 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 OR4F15Q8NGB8 312 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 OR4Q3Q8NH05 313 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 SPPL3Q8TCT6 385 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 CXorf40AQ8TE69 158 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 WFIKKN2Q8TEU8 576 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 SORCS1Q8WY21 1168 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 DIO2Q92813 273 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 NUS1Q96E22 293 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 ZSWIM3Q96MP5 696 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 AMDHD1Q96NU7 426 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 FAIM2Q9BWQ8 316 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 OR52A5Q9H2C5 316 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 OSGEPL1Q9H4B0 414 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 DDX31Q9H8H2 851 aaKnown RBP11.39□□□□□ -0.59
CPSF7-218ENST00000537641 KCNK12Q9HB15 430 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 TEX10Q9NXF1 929 aaPredicted RBP11.39□□□□□ -0.59
CPSF7-218ENST00000537641 C5AR2Q9P296 337 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 SLC23A1Q9UHI7 598 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 NUP50Q9UKX7 468 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 CACNG2Q9Y698 323 aa11.39□□□□□ -0.59
CPSF7-218ENST00000537641 A0A0A6YYD5 115 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 HRO43593 1189 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 SLC22A5O76082 557 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 RPN2P04844 631 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 HMGN1P05114 100 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 TPOP07202 933 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 EPCAMP16422 314 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 HOXD11P31277 338 aaPredicted RBP11.38□□□□□ -0.59
CPSF7-218ENST00000537641 UQCRC1P31930 480 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 TRIM23P36406 574 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 GPR1P46091 355 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 NTHL1P78549 312 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 LSM11P83369 360 aaKnown RBP eCLIP11.38□□□□□ -0.59
CPSF7-218ENST00000537641 FCN2Q15485 313 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 DECR1Q16698 335 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 COL28A1Q2UY09 1125 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 FAM214AQ32MH5 1076 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 ZNF791Q3KP31 576 aaPredicted RBP11.38□□□□□ -0.59
CPSF7-218ENST00000537641 TOR2AQ5JU69 321 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 PYHIN1Q6K0P9 492 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 SMARCD3Q6STE5 483 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 GET4Q7L5D6 327 aaPredicted RBP11.38□□□□□ -0.59
CPSF7-218ENST00000537641 SZRD1Q7Z422 152 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 HDDC2Q7Z4H3 204 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 GID4Q8IVV7 300 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 OR8H1Q8NGG4 311 aa11.38□□□□□ -0.59
CPSF7-218ENST00000537641 OR56A1Q8NGH5 318 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms