RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 PCDHGB2Q9Y5G2 931 aa12.11□□□□□ -0.47
CDK5RAP3-202ENST00000536708 FAM186AA6NE01 2351 aa12.11□□□□□ -0.47
CDK5RAP3-202ENST00000536708 CNOT1A5YKK6 2376 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-202ENST00000536708 CCDC88CQ9P219 2028 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 SGK494L7N484 410 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 MPZL2O60487 215 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 RDH16O75452 317 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 GADD45GO95257 159 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 OXSR1O95747 527 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 AIFM1O95831 613 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 SMIM10L1P0DMW3 83 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 ALOX12P18054 663 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 C21orf33P30042 268 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 PTGER1P34995 402 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 ARL4DP49703 201 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 CASP9P55211 416 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 LSM3P62310 102 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 SUZ12Q15022 739 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 PRTGQ2VWP7 1150 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 NDUFAF5Q5TEU4 345 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 TMEM236Q5W0B7 351 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 ZNF770Q6IQ21 691 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 OR9A4Q8NGU2 314 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 OR5AK3PQ8NH89 298 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 OR1L3Q8NH93 324 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 PSMA8Q8TAA3 256 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 C9orf43Q8TAL5 461 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 SMIM10Q96HG1 83 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 GFM1Q96RP9 751 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 PHOX2BQ99453 314 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 ZNF768Q9H5H4 540 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 CNOT2Q9NZN8 540 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 PLCL2Q9UPR0 1127 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 ASB4Q9Y574 426 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 A0A0A6YYC8 382 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 A0A1W2PR48 441 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 ZAR1LA6NP61 321 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 H3BMH7 237 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 I3L1I5 382 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 J3KTA2 159 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 PCDH17O14917 1159 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 IFNW1P05000 195 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 ZNF24P17028 368 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 CD40LGP29965 261 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 PCBP4P57723 403 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 DNASE1L3Q13609 305 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 RUNX2Q13950 521 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 TIGD6Q17RP2 521 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 MRM1Q6IN84 353 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 TUBA3EQ6PEY2 450 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 ABHD13Q7L211 337 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 D2HGDHQ8N465 521 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 ZNF655Q8N720 491 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 OR9Q2Q8NGE9 314 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 OR52J3Q8NH60 311 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 PROX1Q92786 737 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 RPL3LQ92901 407 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 ZHX1-C8orf76Q96EF9 292 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 DHRS1Q96LJ7 313 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 ZNF285Q96NJ3 590 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 RBCK1Q9BYM8 510 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 NXF2Q9GZY0 626 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 MMP27Q9H306 513 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 NEUROD4Q9HD90 331 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 SLAMF7Q9NQ25 335 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 SEMA5BQ9P283 1151 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 ADAM29Q9UKF5 820 aa12.1□□□□□ -0.47
CDK5RAP3-202ENST00000536708 DSPPQ9NZW4 1301 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 NUP210LQ5VU65 1888 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 AIREO43918 545 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 SOAT1P35610 550 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 NBL1P41271 181 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 PUM1Q14671 1186 aaKnown RBP eCLIP12.09□□□□□ -0.474e-7■□□□□ 11.1
CDK5RAP3-202ENST00000536708 SLC9A5Q14940 896 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 HEPACAMQ14CZ8 416 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 MLC1Q15049 377 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 KCNJ8Q15842 424 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 CSRP2Q16527 193 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 DUSP7Q16829 419 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 PHF19Q5T6S3 580 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 SLC22A16Q86VW1 577 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 SLITRK4Q8IW52 837 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 OR4D9Q8NGE8 314 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 ZNF675Q8TD23 568 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 EXOSC8Q96B26 276 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 CDCA4Q9BXL8 241 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 DCSTAMPQ9H295 470 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 DSN1Q9H410 356 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 FGF21Q9NSA1 209 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 NDOR1Q9UHB4 597 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 TMEM184BQ9Y519 407 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 PCDHGA3Q9Y5H0 932 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 EFCAB10A6NFE3 127 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 METTL15A6NJ78 407 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 NTN3O00634 580 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 PGRMC2O15173 223 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 GALR3O60755 368 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 OR2B3O76000 313 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 PDE9AO76083 593 aa12.09□□□□□ -0.47
CDK5RAP3-202ENST00000536708 MFN2O95140 757 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms