RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 KLF2Q9Y5W3 355 aaPredicted RBP4.81□□□□□ -1.64
CLIP1-207ENST00000536634 SVEP1Q4LDE5 3571 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 NUP210LQ5VU65 1888 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 A0A1B0GUH1 482 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 BLOC1S5-TXNDC5H3BN57 136 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 TOX3O15405 576 aaPredicted RBP4.8□□□□□ -1.64
CLIP1-207ENST00000536634 PALMO75781 387 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 CGAP01215 116 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 KRTAP5-9P26371 169 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 CDH5P33151 784 aaPredicted RBP4.8□□□□□ -1.64
CLIP1-207ENST00000536634 RORAP35398 523 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 KCNK10P57789 538 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 YBEYP58557 167 aaPredicted RBP4.8□□□□□ -1.64
CLIP1-207ENST00000536634 POLR2LP62875 67 aaKnown RBP4.8□□□□□ -1.64
CLIP1-207ENST00000536634 ZNF235Q14590 738 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 PARP15Q460N3 678 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 ZNF876PQ49A33 203 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 PLEKHS1Q5SXH7 462 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 ZNF658Q5TYW1 1059 aaPredicted RBP4.8□□□□□ -1.64
CLIP1-207ENST00000536634 LYPLAL1Q5VWZ2 237 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 ZDHHC20Q5W0Z9 365 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 IRGCQ6NXR0 463 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 IGFL3Q6UXB1 125 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 RBMS3Q6XE24 437 aaKnown RBP4.8□□□□□ -1.64
CLIP1-207ENST00000536634 ENOSF1Q7L5Y1 443 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 UMODL1-AS1Q8N2C9 162 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 JOSD2Q8TAC2 188 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 FAM172AQ8WUF8 416 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 RXFP2Q8WXD0 754 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 SNX21Q969T3 373 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 AP2M1Q96CW1 435 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 PGAM5Q96HS1 289 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 ZNF514Q96K75 400 aaPredicted RBP4.8□□□□□ -1.64
CLIP1-207ENST00000536634 SLC39A8Q9C0K1 460 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 UCK1Q9HA47 277 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 PDE7BQ9NP56 450 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 SIX2Q9NPC8 291 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 EIF2B3Q9NR50 452 aaKnown RBP4.8□□□□□ -1.64
CLIP1-207ENST00000536634 AGPAT4Q9NRZ5 378 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 RARRES3Q9UL19 164 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 NENFQ9UMX5 172 aa4.8□□□□□ -1.64
CLIP1-207ENST00000536634 INTS1Q8N201 2190 aaKnown RBP4.8□□□□□ -1.64
CLIP1-207ENST00000536634 DUXAA6NLW8 204 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 OR52A4PA6NMU1 304 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 C15orf62A8K5M9 175 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 PSMD11O00231 422 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 SCRG1O75711 98 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 LCA5LO95447 670 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 RAB40ALP0C0E4 278 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 ERVK-10P10266 1014 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 OTX2P32243 289 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 NR2C2P49116 596 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 TDGF1P3P51864 188 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 STX17P56962 302 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 SNX16P57768 344 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 ABRQ12979 859 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 TMEM30BQ3MIR4 351 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 DCAF10Q5QP82 559 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 TAF3Q5VWG9 929 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 LRRC66Q68CR7 880 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 KRTAP5-4Q6L8H1 288 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 ARCQ7LC44 396 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 TMEM126BQ8IUX1 230 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 NPWQ8N729 165 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 SIDT2Q8NBJ9 832 aaKnown RBP4.79□□□□□ -1.64
CLIP1-207ENST00000536634 TMEM35BQ8NCS4 154 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 TRIM58Q8NG06 486 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 NTAN1Q96AB6 310 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 LGALS12Q96DT0 336 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 MCCC1Q96RQ3 725 aaPredicted RBP4.79□□□□□ -1.64
CLIP1-207ENST00000536634 RIOK2Q9BVS4 552 aaKnown RBP4.79□□□□□ -1.64
CLIP1-207ENST00000536634 RBM4Q9BWF3 364 aaKnown RBP4.79□□□□□ -1.64
CLIP1-207ENST00000536634 NLNQ9BYT8 704 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 SLA2Q9H6Q3 261 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 PELI2Q9HAT8 420 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 CHST11Q9NPF2 352 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 FGF21Q9NSA1 209 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 EPHA6Q9UF33 1036 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 SLC23A2Q9UGH3 650 aa4.79□□□□□ -1.64
CLIP1-207ENST00000536634 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.79□□□□□ -1.64
CLIP1-207ENST00000536634 PCDH7O60245 1069 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 ALOX12BO75342 701 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 KLF7O75840 302 aaPredicted RBP4.78□□□□□ -1.64
CLIP1-207ENST00000536634 PGLSO95336 258 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 JCHAINP01591 159 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 ALPPP05187 535 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 CD99P14209 185 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 CYP11B1P15538 503 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 XRCC1P18887 633 aaPredicted RBP4.78□□□□□ -1.64
CLIP1-207ENST00000536634 CAPN3P20807 821 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 CBLP22681 906 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 NMBRP28336 390 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 SDC4P31431 198 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 HILS1P60008 231 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 MAXP61244 160 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 AP1S1P61966 158 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 OTUD4Q01804 1114 aaKnown RBP4.78□□□□□ -1.64
CLIP1-207ENST00000536634 ACY1Q03154 408 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 TLE4Q04727 773 aa4.78□□□□□ -1.64
CLIP1-207ENST00000536634 SLC10A7Q0GE19 358 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms