RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 WDR13Q9H1Z4 485 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ANKRA2Q9H9E1 313 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 FOLH1BQ9HBA9 442 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 SARS2Q9NP81 518 aaKnown RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 IMP3Q9NV31 184 aaKnown RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 NYAP2Q9P242 653 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 MARCH4Q9P2E8 410 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 OR12D3Q9UGF7 316 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 MSRAQ9UJ68 235 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 FAM50BQ9Y247 325 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 A0A087X0M5 115 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 A0A1B0GX30 115 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 A6NLC8 198 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 RHPN2P1A8MT19 583 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 TMEM229AB2RXF0 380 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 ZNF593O00488 134 aaPredicted RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 ADAM12O43184 909 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 CACNG3O60359 315 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 RBBP9O75884 186 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 WNT1P04628 370 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 WARSP23381 471 aaKnown RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 NFYAP23511 347 aaPredicted RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 GGT2P36268 569 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 DNAJB13P59910 316 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 DGCR2P98153 550 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 FABP5Q01469 135 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 ATXN7L3Q14CW9 347 aaPredicted RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 SPHARQ15513 63 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 GSG1Q2KHT4 349 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 SOWAHAQ2M3V2 549 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 ZNF699Q32M78 642 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 COX20Q5RI15 118 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 C3orf33Q6P1S2 294 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 ZNF529Q6P280 563 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 HSDL2Q6YN16 418 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 SYT9Q86SS6 491 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 NR2C2APQ86WQ0 139 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 ZFAND4Q86XD8 727 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 SIAH3Q8IW03 269 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 IQCF1Q8N6M8 205 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 PXT1Q8NFP0 134 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 NUBPLQ8TB37 319 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 SCARB1Q8WTV0 552 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 CCDC107Q8WV48 283 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 THAP4Q8WY91 577 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 ZC3HAV1LQ96H79 300 aaKnown RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 HSH2DQ96JZ2 352 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 MSLNLQ96KJ4 702 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 ELF4Q99607 663 aaPredicted RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 KCNJ15Q99712 375 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 IFT27Q9BW83 186 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 NT5C1AQ9BXI3 368 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 CACNG6Q9BXT2 260 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 PBX4Q9BYU1 374 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 SPATC1LQ9H0A9 340 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 XYLT2Q9H1B5 865 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 SEMA6CQ9H3T2 930 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 ASF1BQ9NVP2 202 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 MPP6Q9NZW5 540 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 PIPOXQ9P0Z9 390 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 RAI2Q9Y5P3 530 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 DNAH14Q0VDD8 3507 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 EVPLQ92817 2033 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 MYLKQ15746 1914 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 RANBP2P49792 3224 aaKnown RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 NLRC5Q86WI3 1866 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 IQCMA0A1B0GVH7 501 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 PLSCR5A0PG75 271 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 TMEM82A0PJX8 343 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 HYKKA2RU49 373 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 A6NCN8 305 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 IFITM10A6NMD0 228 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 H7C1Q1 480 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 SEC14L5O43304 696 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 TPST2O60704 377 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 PQBP1O60828 265 aaKnown RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 PRAMEF12O95522 483 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 PAK4O96013 591 aaPredicted RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 SERPINA3P01011 423 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 ESR1P03372 595 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 RPS17P08708 135 aaKnown RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 PIRTP0C851 137 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 SULT1A3P0DMM9 295 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 SULT1A4P0DMN0 295 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 MLNP12872 115 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 DRD2P14416 443 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 GABRA1P14867 456 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 CCND3P30281 292 aaPredicted RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 HOXA6P31267 233 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 CNR2P34972 360 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 ADH7P40394 386 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 ETV5P41161 510 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 EVX1P49640 407 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 CDKN1CP49918 316 aaPredicted RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 ATP4BP51164 291 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 HMGCS2P54868 508 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 CDH12P55289 794 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 OR10A3P58181 314 aa3.5□□□□□ -1.85
MCF2-210ENST00000536274 RPL38P63173 70 aaKnown RBP3.5□□□□□ -1.85
MCF2-210ENST00000536274 KCNJ10P78508 379 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms