RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 WDR53Q7Z5U6 358 aaPredicted RBP12.42□□□□□ -0.42
RPAIN-205ENST00000536255 COX18Q8N8Q8 333 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 SLC16A11Q8NCK7 471 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 OR2M7Q8NG81 312 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 OR4N2Q8NGD1 307 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 SSC4DQ8WTU2 575 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 TSPEARQ8WU66 669 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 C10orf82Q8WW14 230 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 VPS33AQ96AX1 596 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 NEURL3Q96EH8 262 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 C16orf58Q96GQ5 468 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 SLC35G5Q96KT7 338 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 ADOQ96SZ5 270 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 YIPF4Q9BSR8 244 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 G6PC3Q9BUM1 346 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 FAM107BQ9H098 131 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 PIGUQ9H490 435 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 ZNF385DQ9H6B1 395 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 METTL7AQ9H8H3 244 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 GPATCH2Q9NW75 528 aa12.42□□□□□ -0.42
RPAIN-205ENST00000536255 FLNBO75369 2602 aaKnown RBP12.42□□□□□ -0.42
RPAIN-205ENST00000536255 A0A0G2JMM0 328 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 A0A1W2PPB8 328 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 A0A1W2PRS3 328 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 KIR3DP1A8MWS1 328 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 G3V3Y1 287 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 ACOT7O00154 380 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 ASNA1O43681 348 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 TSPAN2O60636 221 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 UGT2B11O75310 529 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 SNX4O95219 450 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 IL33O95760 270 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 ZCCHC18P0CG32 403 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 ACP2P11117 423 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 MATN1P21941 496 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 ADSLP30566 484 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-205ENST00000536255 LCN1P31025 176 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 KCNJ2P63252 427 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 POU6F2P78424 691 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-205ENST00000536255 RBPJQ06330 500 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 SNTA1Q13424 505 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 DUSP5Q16690 384 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.41□□□□□ -0.42
RPAIN-205ENST00000536255 EXOSC6Q5RKV6 272 aaKnown RBP12.41□□□□□ -0.42
RPAIN-205ENST00000536255 SAXO2Q658L1 398 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 ANGPTL8Q6UXH0 198 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 PACS2Q86VP3 889 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 FUNDC1Q8IVP5 155 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 FBXO30Q8TB52 745 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 MIPOL1Q8TD10 442 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 PIK3R3Q92569 461 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 HGDQ93099 445 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 EFHD2Q96C19 240 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-205ENST00000536255 RMND5BQ96G75 393 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-205ENST00000536255 ELAC2Q9BQ52 826 aaKnown RBP12.41□□□□□ -0.42
RPAIN-205ENST00000536255 INPP5KQ9BT40 448 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 DOHHQ9BU89 302 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 BTBD2Q9BX70 525 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 SERHLQ9NQF3 203 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 FAM53CQ9NYF3 392 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 KLRF1Q9NZS2 232 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 CNOT11Q9UKZ1 510 aaKnown RBP12.41□□□□□ -0.42
RPAIN-205ENST00000536255 BOKQ9UMX3 212 aaPredicted RBP12.41□□□□□ -0.42
RPAIN-205ENST00000536255 HECTD1Q9ULT8 2610 aa12.41□□□□□ -0.42
RPAIN-205ENST00000536255 PTPN13Q12923 2485 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 HIVEP3Q5T1R4 2406 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 SVILO95425 2214 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 A0A1W2PP18 115 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 PINLYPA6NC86 204 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 ANGPT2O15123 496 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 SLC22A2O15244 555 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 LRRTM2O43300 516 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 SLC19A2O60779 497 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 CCDC22O60826 627 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 KCNK2O95069 426 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 AK1P00568 194 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 LDLRP01130 860 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 RNF224P0DH78 156 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 ATP6V1C1P21283 382 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 MAGEA8P43361 318 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 RFX3P48380 749 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 CLK3P49761 638 aaKnown RBP12.4□□□□□ -0.42
RPAIN-205ENST00000536255 KHKP50053 298 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 PLGLB1Q02325 96 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 MAPRE2Q15555 327 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.4□□□□□ -0.42
RPAIN-205ENST00000536255 ATAD3BQ5T9A4 648 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 PRAMEF20Q5VT98 475 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 C1QL3Q5VWW1 255 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 SLC30A6Q6NXT4 461 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 DNAJC14Q6Y2X3 702 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-205ENST00000536255 BNC2Q6ZN30 1099 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-205ENST00000536255 SLC22A16Q86VW1 577 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 GHDCQ8N2G8 530 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 GTF2H4Q92759 462 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 DTNBP1Q96EV8 351 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 PHF12Q96QT6 1004 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 OR7D2Q96RA2 312 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 OSBPL11Q9BXB4 747 aa12.4□□□□□ -0.42
RPAIN-205ENST00000536255 ANGPTL4Q9BY76 406 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms