RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ACAD8Q9UKU7 415 aa16.86■□□□□ 0.29
RAB40C-203ENST00000535977 SCG5P05408 212 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 PRDX1Q06830 199 aaKnown RBP16.85■□□□□ 0.29
RAB40C-203ENST00000535977 GRM7Q14831 915 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 COL28A1Q2UY09 1125 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 BHLHB9Q6PI77 547 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 NUDT18Q6ZVK8 323 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 GPR32P1Q8NGA4 272 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 OR6C4Q8NGE1 309 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 SLC25A46Q96AG3 418 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 EXOSC8Q96B26 276 aaKnown RBP16.85■□□□□ 0.29
RAB40C-203ENST00000535977 LHX9Q9NQ69 397 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 RDH8Q9NYR8 311 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 GDE1Q9NZC3 331 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 PLEKHB1Q9UF11 243 aaPredicted RBP16.85■□□□□ 0.29
RAB40C-203ENST00000535977 INMT-MINDY4F8WBC2 141 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 BMP8BP34820 402 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 CSNK1G2P78368 415 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 LEXMQ3ZCV2 418 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 IGSF11Q5DX21 431 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 TMEM201Q5SNT2 666 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 TCTN3Q6NUS6 607 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 TRILQ7L0X0 811 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 BMP8AQ7Z5Y6 402 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 SIPA1Q96FS4 1042 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 FZD3Q9NPG1 666 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 SEC14L3Q9UDX4 400 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 MALT1Q9UDY8 824 aa16.85■□□□□ 0.29
RAB40C-203ENST00000535977 FEZF1A0PJY2 475 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 SMIM30A4D0T7 59 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 TMPRSS11DO60235 418 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 CKMT1AP12532 417 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 TRIM23P36406 574 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 COX10Q12887 443 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 NDUFA9Q16795 377 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 Q8N402 240 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 IL17RCQ8NAC3 791 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 KIAA1143Q96AT1 154 aaPredicted RBP16.84■□□□□ 0.29
RAB40C-203ENST00000535977 TIMM29Q9BSF4 260 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 LGR4Q9BXB1 951 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 MS4A7Q9GZW8 240 aaPredicted RBP16.84■□□□□ 0.29
RAB40C-203ENST00000535977 PIGUQ9H490 435 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 WDR26Q9H7D7 661 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 PHPT1Q9NRX4 125 aaPredicted RBP16.84■□□□□ 0.29
RAB40C-203ENST00000535977 IL20Q9NYY1 176 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 UBQLN2Q9UHD9 624 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 HRH3Q9Y5N1 445 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 A0A0A6YYD5 115 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 TLR4O00206 839 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 KHNYNO15037 678 aaKnown RBP16.84■□□□□ 0.29
RAB40C-203ENST00000535977 CHP2O43745 196 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 SLC28A2O43868 658 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 HCN1O60741 890 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 PCDH8O95206 1070 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 MPC2O95563 127 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 IFNA7P01567 189 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 HOXB3P14651 431 aaPredicted RBP16.84■□□□□ 0.29
RAB40C-203ENST00000535977 PSMA1P25786 263 aaKnown RBP16.84■□□□□ 0.29
RAB40C-203ENST00000535977 ELAVL4P26378 380 aaKnown RBP16.84■□□□□ 0.29
RAB40C-203ENST00000535977 RPS26P62854 115 aaKnown RBP16.84■□□□□ 0.29
RAB40C-203ENST00000535977 NCF4Q15080 339 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 RPS26P11Q5JNZ5 115 aaPredicted RBP16.84■□□□□ 0.29
RAB40C-203ENST00000535977 DDI2Q5TDH0 399 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 TBC1D19Q8N5T2 526 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 CEP76Q8TAP6 659 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 SLC35G5Q96KT7 338 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 SLC25A19Q9HC21 320 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 RHCGQ9UBD6 479 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 REV1Q9UBZ9 1251 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 SEC14L4Q9UDX3 406 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 CSNK1G3Q9Y6M4 447 aa16.84■□□□□ 0.29
RAB40C-203ENST00000535977 TRBV4-1A0A0J9YWV2 114 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 LINC01387J3KSC0 135 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 ADH1BP00325 375 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 HLA-DQB1P01920 261 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 NTSP30990 170 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 DRD3P35462 400 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 RAB28P51157 221 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 TMEM64Q6YI46 380 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 GDPGP1Q6ZNW5 385 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 UBE3DQ7Z6J8 389 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 TMEM145Q8NBT3 493 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 BBS10Q8TAM1 723 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 FGF13Q92913 245 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 RBP7Q96R05 134 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 B3GAT2Q9NPZ5 323 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 SEMA3GQ9NS98 782 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 MRPL39Q9NYK5 338 aaKnown RBP16.83■□□□□ 0.29
RAB40C-203ENST00000535977 STUB1Q9UNE7 303 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 FKBP7Q9Y680 259 aa16.83■□□□□ 0.29
RAB40C-203ENST00000535977 ANHXE9PGG2 379 aa16.83■□□□□ 0.28
RAB40C-203ENST00000535977 OR10H3O60404 316 aa16.83■□□□□ 0.28
RAB40C-203ENST00000535977 ZP3P21754 424 aa16.83■□□□□ 0.28
RAB40C-203ENST00000535977 POU1F1P28069 291 aa16.83■□□□□ 0.28
RAB40C-203ENST00000535977 SSTR2P30874 369 aa16.83■□□□□ 0.28
RAB40C-203ENST00000535977 OPRD1P41143 372 aa16.83■□□□□ 0.28
RAB40C-203ENST00000535977 FOXD4Q12950 439 aaPredicted RBP16.83■□□□□ 0.28
RAB40C-203ENST00000535977 TUSC1Q2TAM9 212 aa16.83■□□□□ 0.28
RAB40C-203ENST00000535977 RNLSQ5VYX0 342 aa16.83■□□□□ 0.28
RAB40C-203ENST00000535977 CD300LDQ6UXZ3 194 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms