RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 TCHHL1Q5QJ38 904 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 PDSS1Q5T2R2 415 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 GALNT18Q6P9A2 607 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 TMEM107Q6UX40 140 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 CEP70Q8NHQ1 597 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 L3HYPDHQ96EM0 354 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 CHMP6Q96FZ7 201 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 APIPQ96GX9 242 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 REXO5Q96IC2 774 aaKnown RBP12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 ZNF845Q96IR2 970 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 VSTM2LQ96N03 204 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 UCN2Q96RP3 112 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 DSN1Q9H410 356 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 PPCSQ9HAB8 311 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 PAQR5Q9NXK6 330 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 HEY2Q9UBP5 337 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 TBK1Q9UHD2 729 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 PROCRQ9UNN8 238 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 EMC9Q9Y3B6 208 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 TIMM22Q9Y584 194 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 ARHGAP21Q5T5U3 1957 aa12.01□□□□□ -0.49
CLSTN3-205ENST00000535452 SLC28A1O00337 649 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 RIPK2O43353 540 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 TSPAN2O60636 221 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 SMPD2O60906 423 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 RSL1D1O76021 490 aaKnown RBP12□□□□□ -0.49
CLSTN3-205ENST00000535452 CT45A8P0DMV1 189 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 CT45A9P0DMV2 189 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 PTGDSP41222 190 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 MC3RP41968 323 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 LHX2P50458 406 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 GFRA1P56159 465 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 CTBP2P56545 445 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 FOXD4Q12950 439 aaPredicted RBP12□□□□□ -0.49
CLSTN3-205ENST00000535452 KRTAP21-3Q3LHN1 58 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 CT45A2Q5DJT8 189 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 GTF2IRD2BQ6EKJ0 949 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 BIVMQ86UB2 503 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 GTF2IRD2Q86UP8 949 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 STK32CQ86UX6 486 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 NOA1Q8NC60 698 aaKnown RBP12□□□□□ -0.49
CLSTN3-205ENST00000535452 PGM2Q96G03 612 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 METTL2AQ96IZ6 378 aaKnown RBP12□□□□□ -0.49
CLSTN3-205ENST00000535452 PINK1Q9BXM7 581 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 LIME1Q9H400 295 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 ZNF395Q9H8N7 513 aaPredicted RBP12□□□□□ -0.49
CLSTN3-205ENST00000535452 FAM120CQ9NX05 1096 aaKnown RBP12□□□□□ -0.49
CLSTN3-205ENST00000535452 JKAMPQ9P055 326 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 FBXL2Q9UKC9 423 aa12□□□□□ -0.49
CLSTN3-205ENST00000535452 MCTS1Q9ULC4 181 aaKnown RBP12□□□□□ -0.49
CLSTN3-205ENST00000535452 A0A1W2PNV4 684 aa11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 A8MXE2 369 aa11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 NDUFB5O43674 189 aa11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 SEC22BO75396 215 aa11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 SYNGR4O95473 234 aa11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 PYGBP11216 843 aa11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 CD79BP40259 229 aa11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 ZNF41P51814 821 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 SIRPAP78324 504 aa11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 NKX6-1P78426 367 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 FOXF2Q12947 444 aa11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 DESI1Q6ICB0 168 aa11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 OR7G2Q8NG99 324 aa11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 GPR151Q8TDV0 419 aa11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 ZBED6CLQ96FA7 236 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 MYNNQ9NPC7 610 aa11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 CLCF1Q9UBD9 225 aa11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 C19orf53Q9UNZ5 99 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 ZNF175Q9Y473 711 aa11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 POLR3HQ9Y535 204 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 AP4B1Q9Y6B7 739 aa11.99□□□□□ -0.49
CLSTN3-205ENST00000535452 MED13LQ71F56 2210 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 A0A1B0GTL3 188 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 SERTM1A2A2V5 107 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 MYO1GB0I1T2 1018 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 KDM4EB2RXH2 506 aaPredicted RBP11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 C16orf97H3BN30 126 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 COPEO14579 308 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 PDPK1O15530 556 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 TNFRSF21O75509 655 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 ATE1O95260 518 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 HSPA4LO95757 839 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 PABPC4LP0CB38 370 aaKnown RBP11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 UROSP10746 265 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 PRPS2P11908 318 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 NEFHP12036 1026 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 CHN1P15882 459 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 GABRA3P34903 492 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 RPL3P39023 403 aaKnown RBP11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 SLCO1A2P46721 670 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 PRKAG1P54619 331 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 MANFP55145 182 aaKnown RBP11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 CLDN18P56856 261 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 ADAM8P78325 824 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 PRR5P85299 388 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 DUSP2Q05923 314 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 GLYR1Q49A26 553 aaPredicted RBP11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 NOXRED1Q6NXP6 359 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 ZYG11AQ6WRX3 759 aa11.98□□□□□ -0.49
CLSTN3-205ENST00000535452 MISPQ8IVT2 679 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms