RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 TOE1Q96GM8 510 aaKnown RBP17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 LMF1Q96S06 567 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 ABCG5Q9H222 651 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 LMO7Q8WWI1 1683 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 MEIS3P2A8K0S8 358 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 DDCP20711 480 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 HTR2AP28223 471 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 PRKXP51817 358 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 ERVK-16P61578 105 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 ZXDBP98169 803 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 TAS2R8Q9NYW2 309 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 DNAJB11Q9UBS4 358 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 B3GALT1Q9Y5Z6 326 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 AMY2AP04746 511 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 MC3RP41968 323 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 RGNQ15493 299 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 CFAP77Q6ZQR2 320 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 CDHR3Q6ZTQ4 885 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 OR4K3Q96R72 315 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 DPH1Q9BZG8 443 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 HCFC1R1Q9NWW0 138 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 NENFQ9UMX5 172 aa17.19■□□□□ 0.34
SFSWAP-203ENST00000535236 CD34P28906 385 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 NTRK2Q16620 822 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 ZNF791Q3KP31 576 aaPredicted RBP17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 PM20D1Q6GTS8 502 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 C17orf99Q6UX52 265 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 PXKQ7Z7A4 578 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 LILRB2Q8N423 598 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 FAM71F1Q96KD3 344 aaPredicted RBP17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 DUSP23Q9BVJ7 150 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 GPR83Q9NYM4 423 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 ENPP4Q9Y6X5 453 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 SULT2B1O00204 365 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 UGDHO60701 494 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 CD63P08962 238 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 DNASE1P24855 282 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 AGTR1P30556 359 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 CLDN2P57739 230 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 DPPA4Q7L190 304 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 CBARPQ8N350 705 aaPredicted RBP17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 POC1BQ8TC44 478 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 TANKQ92844 425 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 LGALS12Q96DT0 336 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 TCEAL4Q96EI5 215 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 STARD5Q9NSY2 213 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 NFS1Q9Y697 457 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 KIR2DS5A0A0G2JLQ3 304 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 A0A0G2JNG1 304 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 ANKRD30BLA7E2S9 258 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 KIR2DS3K7RE56 304 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 CRTAPO75718 401 aaPredicted RBP17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 MMP2P08253 660 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 KIR2DS5Q14953 304 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 VWA5B2Q8N398 1253 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 MARVELD2Q8N4S9 558 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 ACOT13Q9NPJ3 140 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 PCDHA9Q9Y5H5 950 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 ACTL7AQ9Y615 435 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 F5H5K5 113 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 YY2O15391 372 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 UBL4AP11441 157 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 OSMP13725 252 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 POU3F2P20265 443 aaPredicted RBP17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 GDF1P27539 372 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 HTR6P50406 440 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 ZNF616Q08AN1 781 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 FCRLBQ6BAA4 426 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 ISCA2Q86U28 154 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 PRR18Q8N4B5 295 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 NPRL2Q8WTW4 380 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 POLE4Q9NR33 117 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 PCDHB10Q9UN67 800 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 MEGF11A6BM72 1044 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 ZNF705EA8MWA4 302 aaPredicted RBP17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 GABARAPL2P60520 117 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 C6orf132Q5T0Z8 1188 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 LDLRAD1Q5T700 205 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 LRRTM3Q86VH5 581 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 TP53INP2Q8IXH6 220 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 SACM1LQ9NTJ5 587 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 CUEDC1Q9NWM3 386 aaPredicted RBP17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 SPO11Q9Y5K1 396 aa17.18■□□□□ 0.34
SFSWAP-203ENST00000535236 HHLA1C9JL84 531 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 GOLM1Q8NBJ4 401 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 CIDECQ96AQ7 238 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 IL26Q9NPH9 171 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 SPEF2Q9C093 1822 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 FAM171A2A8MVW0 826 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 CER1O95813 267 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 COMTD1Q86VU5 262 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 IQCF1Q8N6M8 205 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 ZNF610Q8N9Z0 462 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 TRIM64CA6NLI5 447 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 H7C2Y5 167 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 PBX2P40425 430 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 CEACAM7Q14002 265 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 HNRNPA1L2Q32P51 320 aaKnown RBP17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 HES5Q5TA89 166 aa17.17■□□□□ 0.34
SFSWAP-203ENST00000535236 NADSYN1Q6IA69 706 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms