RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 SLITRK5O94991 958 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 IL18BPO95998 194 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 IL2RAP01589 272 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 IFI6P09912 130 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 CD53P19397 219 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 BMP5P22003 454 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 TACR1P25103 407 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 CTSSP25774 331 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 SRD5A2P31213 254 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 CCT5P48643 541 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 LHX2P50458 406 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 ASCL1P50553 236 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 C2orf80Q0P641 193 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 EFR3AQ14156 821 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 DAZAP2Q15038 168 aaPredicted RBP9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 PLCZ1Q86YW0 608 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 TRIM42Q8IWZ5 723 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 FAM9CQ8IZT9 166 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 CCNYL1Q8N7R7 359 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 C9orf106Q8NAJ2 232 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 OR4N2Q8NGD1 307 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 RDH11Q8TC12 318 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 RNASE6Q93091 150 aaKnown RBP9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 LRRC46Q96FV0 321 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 FCRL1Q96LA6 429 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 Q96MF0 132 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 ADOQ96SZ5 270 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 BDH2Q9BUT1 245 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 C12orf65Q9H3J6 166 aaKnown RBP9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 GLIPR2Q9H4G4 154 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 L2HGDHQ9H9P8 463 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 PPCSQ9HAB8 311 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 MYNNQ9NPC7 610 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 SERHLQ9NQF3 203 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 TAS2R9Q9NYW1 312 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 FOXD3Q9UJU5 478 aaPredicted RBP9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 FBXL2Q9UKC9 423 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 C19orf53Q9UNZ5 99 aaPredicted RBP9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 MAPRE3Q9UPY8 281 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 CAMK2AQ9UQM7 478 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 WIF1Q9Y5W5 379 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 UPK1AO00322 258 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 FADS1O60427 444 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 RCBTB2O95199 551 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 UROSP10746 265 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 CHMP24386 653 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 MAP3K8P41279 467 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 B3GALT5-AS1P59052 145 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 TOMM20Q15388 145 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 ERCC6LQ2NKX8 1250 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 CYP27C1Q4G0S4 372 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 LIPMQ5VYY2 423 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 NOXRED1Q6NXP6 359 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 Q6ZSR9 355 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 LARP4Q71RC2 724 aaKnown RBP eCLIP9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 SLC44A2Q8IWA5 706 aaPredicted RBP9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 OR2L13Q8N349 312 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 FADS6Q8N9I5 356 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 HOXB13Q92826 284 aaPredicted RBP9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 ELP4Q96EB1 424 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 ZNF764Q96H86 408 aaPredicted RBP9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 EGLN2Q96KS0 407 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 BBS4Q96RK4 519 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 TRIB1Q96RU8 372 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 TUBA1CQ9BQE3 449 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 PFDN4Q9NQP4 134 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 GIMAP4Q9NUV9 329 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 CLCF1Q9UBD9 225 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 POLR3HQ9Y535 204 aaPredicted RBP9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 ZANQ9Y493 2812 aa9.12□□□□□ -0.95
CLSTN3-203ENST00000534830 TUBAL3A6NHL2 446 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 C17orf51A8MQB3 221 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 HCRTR2O43614 444 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 TBX19O60806 448 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 COQ9O75208 318 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 JUNP05412 331 aaKnown RBP9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 EPXP11678 715 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 CYP4B1P13584 511 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 CPA3P15088 417 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 ZNF708P17019 499 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 GRK2P25098 689 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 IL12BP29460 328 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 EVI2BP34910 448 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 OPRM1P35372 400 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 MC3RP41968 323 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 FRKP42685 505 aaPredicted RBP9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 NCBP2P52298 156 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 CLDN18P56856 261 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 GAB1Q13480 694 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 PCLAFQ15004 111 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 POU4F3Q15319 338 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 IMPG1Q17R60 797 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 SPDYAQ5MJ70 313 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 HMBOX1Q6NT76 420 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 ENPP6Q6UWR7 440 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 TMEM107Q6UX40 140 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 IKBIPQ70UQ0 350 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 CXorf67Q86X51 503 aaPredicted RBP9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 C10orf107Q8IVU9 208 aa9.11□□□□□ -0.95
CLSTN3-203ENST00000534830 OR14L1PQ8NHC6 308 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms