RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	INHBB	P09529	407 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	CT62	P0C5K7	136 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	TMIGD3	P0DMS9	266 aa	Predicted RBP	10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	TROVE2	P10155	538 aa	Known RBP eCLIP	10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	CYP4B1	P13584	511 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	CPM	P14384	443 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	POR	P16435	677 aa	Predicted RBP	10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	GPX3	P22352	226 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	CHM	P24386	653 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	GMPR	P36959	345 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	XK	P51811	444 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	DCAF7	P61962	342 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	DMTN	Q08495	405 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	MAP4K2	Q12851	820 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	GAB1	Q13480	694 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	CPSF6	Q16630	551 aa	Known RBP eCLIP	10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	PFKFB4	Q16877	469 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	FAM83E	Q2M2I3	478 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	WIPI1	Q5MNZ9	446 aa	Predicted RBP	10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	DCST1	Q5T197	706 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	KLC3	Q6P597	504 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	SCIMP	Q6UWF3	145 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	MYLK4	Q86YV6	388 aa	Predicted RBP	10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	KRTAP1-3	Q8IUG1	177 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	CENPL	Q8N0S6	344 aa	Predicted RBP	10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	C9orf106	Q8NAJ2	232 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	FAM83F	Q8NEG4	500 aa	Predicted RBP	10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	HGD	Q93099	445 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	KCTD12	Q96CX2	325 aa	Known RBP	10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	ARSG	Q96EG1	525 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	PIGM	Q9H3S5	423 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	IPPK	Q9H8X2	491 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	ZNF639	Q9UID6	485 aa		10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	EXO1	Q9UQ84	846 aa	Known RBP	10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.5	□□□□□ -0.73
CTNND1-238	ENST00000534647	MPDZ	O75970	2070 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	TRBV23-1	A0A0A0MS06	115 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647		A0A1W2PS29	197 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	FAM171A2	A8MVW0	826 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	EEF1E1-BLOC1S5	C9J1V9	151 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	ACOX3	O15254	700 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	EEF1E1	O43324	174 aa	Known RBP	10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	EDF1	O60869	148 aa	Known RBP	10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	ICOSLG	O75144	302 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	ERN1	O75460	977 aa	Known RBP	10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	CLDN9	O95484	217 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	PROC	P04070	461 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	ATP1B1	P05026	303 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	CPA3	P15088	417 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	BGN	P21810	368 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	DRD5	P21918	477 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	ALDH3A1	P30838	453 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	GCK	P35557	465 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	SOX18	P35713	384 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	PTGDS	P41222	190 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	AGFG1	P52594	562 aa	Known RBP	10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	NKX6-1	P78426	367 aa	Predicted RBP	10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	MGAT2	Q10469	447 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	FOXF2	Q12947	444 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	GTF2H2	Q13888	395 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	GTF2H2C	Q6P1K8	395 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	ENPP6	Q6UWR7	440 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	SPATA21	Q7Z572	469 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	GOLGA7	Q7Z5G4	137 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	CXorf67	Q86X51	503 aa	Predicted RBP	10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	LRRC75A-AS1	Q8N1F1	130 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	WDSUB1	Q8N9V3	476 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	RDH11	Q8TC12	318 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	CTHRC1	Q96CG8	243 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	GPR78	Q96P69	363 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	PIP5K1A	Q99755	562 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	NTMT1	Q9BV86	223 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	RBM24	Q9BX46	236 aa	Known RBP	10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	OR2B2	Q9GZK3	357 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	NXF5	Q9H1B4	397 aa	Known RBP	10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	METTL7A	Q9H8H3	244 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	AHSP	Q9NZD4	102 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	TMEM216	Q9P0N5	145 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	CES1P1	Q9UKY3	287 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647	RNF11	Q9Y3C5	154 aa		10.49	□□□□□ -0.73
CTNND1-238	ENST00000534647		A0A1W2PPR1	153 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	SH3D21	A4FU49	640 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647		A8MXE2	369 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	GNB5	O14775	395 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	KLF11	O14901	512 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	T	O15178	435 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	ARHGEF9	O43307	516 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	GUCY1B2	O75343	617 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	KLHL2	O95198	593 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	GBA	P04062	536 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	MYL2	P10916	166 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	GFAP	P14136	432 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	PPIC	P45877	212 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	GFRA1	P56159	465 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	IRF9	Q00978	393 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	STX3	Q13277	289 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	TOMM20	Q15388	145 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	CHI3L2	Q15782	390 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	PRICKLE4	Q2TBC4	344 aa		10.48	□□□□□ -0.73
CTNND1-238	ENST00000534647	C6orf163	Q5TEZ5	329 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms