RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 UTS2RQ9UKP6 389 aa13.42□□□□□ -0.26
CTSB-230ENST00000534149 UQCRHLA0A096LP55 91 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 HMX2A2RU54 273 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 OR2M5A3KFT3 312 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 BCAS2O75934 225 aaPredicted RBP13.41□□□□□ -0.26
CTSB-230ENST00000534149 PDYNP01213 254 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 CTAGE8P0CG41 777 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 PAFAH1B1P43034 410 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 NAB1Q13506 487 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 ERCC6LQ2NKX8 1250 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 TECRLQ5HYJ1 363 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 C10orf62Q5T681 223 aaPredicted RBP13.41□□□□□ -0.26
CTSB-230ENST00000534149 PPP4R4Q6NUP7 873 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 STAC2Q6ZMT1 411 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 RPS27LQ71UM5 84 aaKnown RBP13.41□□□□□ -0.26
CTSB-230ENST00000534149 WFDC8Q8IUA0 241 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 SLC44A2Q8IWA5 706 aaPredicted RBP13.41□□□□□ -0.26
CTSB-230ENST00000534149 CTAGE4Q8IX94 777 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 C1orf52Q8N6N3 182 aaKnown RBP13.41□□□□□ -0.26
CTSB-230ENST00000534149 ZNF611Q8N823 705 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 OR4F6Q8NGB9 312 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 HBEGFQ99075 208 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 ERP44Q9BS26 406 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 STMN4Q9H169 189 aaPredicted RBP13.41□□□□□ -0.26
CTSB-230ENST00000534149 FLRT3Q9NZU0 649 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 CLEC4AQ9UMR7 237 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 LAMP3Q9UQV4 416 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 OR10H1Q9Y4A9 318 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 SAR1BQ9Y6B6 198 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 NBEAL1Q6ZS30 2694 aa13.41□□□□□ -0.26
CTSB-230ENST00000534149 TMCC2O75069 709 aa13.4□□□□□ -0.26
CTSB-230ENST00000534149 ESRRBO95718 433 aa13.4□□□□□ -0.26
CTSB-230ENST00000534149 PPP3CBP16298 524 aa13.4□□□□□ -0.26
CTSB-230ENST00000534149 MAGEA4P43358 317 aa13.4□□□□□ -0.26
CTSB-230ENST00000534149 SLC6A8P48029 635 aa13.4□□□□□ -0.26
CTSB-230ENST00000534149 RPS3AP61247 264 aaKnown RBP13.4□□□□□ -0.26
CTSB-230ENST00000534149 RPS4XP62701 263 aaKnown RBP13.4□□□□□ -0.26
CTSB-230ENST00000534149 GANABQ14697 944 aaKnown RBP13.4□□□□□ -0.26
CTSB-230ENST00000534149 GGTA1PQ4G0N0 100 aa13.4□□□□□ -0.26
CTSB-230ENST00000534149 MILR1Q7Z6M3 343 aa13.4□□□□□ -0.26
CTSB-230ENST00000534149 PLD6Q8N2A8 252 aaKnown RBP13.4□□□□□ -0.26
CTSB-230ENST00000534149 METTL25Q8N6Q8 603 aa13.4□□□□□ -0.26
CTSB-230ENST00000534149 SELENOMQ8WWX9 145 aa13.4□□□□□ -0.26
CTSB-230ENST00000534149 AKAP1Q92667 903 aaKnown RBP eCLIP13.4□□□□□ -0.26
CTSB-230ENST00000534149 EXOSC8Q96B26 276 aaKnown RBP13.4□□□□□ -0.26
CTSB-230ENST00000534149 TMEM204Q9BSN7 226 aa13.4□□□□□ -0.26
CTSB-230ENST00000534149 RTN4RQ9BZR6 473 aa13.4□□□□□ -0.26
CTSB-230ENST00000534149 VPS11Q9H270 941 aa13.4□□□□□ -0.26
CTSB-230ENST00000534149 EMC9Q9Y3B6 208 aa13.4□□□□□ -0.26
CTSB-230ENST00000534149 FAM187AA6NFU0 413 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 SHISA8B8ZZ34 492 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 PPP6CO00743 305 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 RAD51CO43502 376 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 ALDOAP04075 364 aaKnown RBP13.39□□□□□ -0.27
CTSB-230ENST00000534149 TP53P04637 393 aaPredicted RBP13.39□□□□□ -0.27
CTSB-230ENST00000534149 IL3P08700 152 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 FCGR2AP12318 317 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 TYK2P29597 1187 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 TRA2BP62995 288 aaKnown RBP13.39□□□□□ -0.27
CTSB-230ENST00000534149 PSPHP78330 225 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 MRPS22P82650 360 aaKnown RBP13.39□□□□□ -0.27
CTSB-230ENST00000534149 ZNF155Q12901 538 aaPredicted RBP13.39□□□□□ -0.27
CTSB-230ENST00000534149 UAP1Q16222 522 aaPredicted RBP13.39□□□□□ -0.27
CTSB-230ENST00000534149 SGCBQ16585 318 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 SH2D4BQ5SQS7 431 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 ALKBH2Q6NS38 261 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 LETMD1Q6P1Q0 360 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 PODNL1Q6PEZ8 512 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 OR7G2Q8NG99 324 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 OR6K3Q8NGY3 331 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 UHMK1Q8TAS1 419 aaKnown RBP13.39□□□□□ -0.27
CTSB-230ENST00000534149 GFM2Q969S9 779 aaKnown RBP13.39□□□□□ -0.27
CTSB-230ENST00000534149 ERP27Q96DN0 273 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 MTBPQ96DY7 904 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 C1GALT1C1Q96EU7 318 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 REG4Q9BYZ8 158 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 ACTR6Q9GZN1 396 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 BRF2Q9HAW0 419 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 PLSCR4Q9NRQ2 329 aa13.39□□□□□ -0.27
CTSB-230ENST00000534149 STX16-NPEPL1H3BU86 382 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 LINC01387J3KSC0 135 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 STX16O14662 325 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 GMFGO60234 142 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 FADS1O60427 444 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 PLGP00747 810 aaPredicted RBP13.38□□□□□ -0.27
CTSB-230ENST00000534149 IFNA2P01563 188 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 TSPAN8P19075 237 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 SERPINB8P50452 374 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 PLTPP55058 493 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 LGSNQ5TDP6 509 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 GGNQ86UU5 652 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 RAB3IL1Q8TBN0 382 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 FBXO25Q8TCJ0 367 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 NAPGQ99747 312 aaPredicted RBP13.38□□□□□ -0.27
CTSB-230ENST00000534149 PRRG4Q9BZD6 226 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 PTGES2Q9H7Z7 377 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 YAE1D1Q9NRH1 226 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 SDHAF3Q9NRP4 125 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 SENP1Q9P0U3 644 aa13.38□□□□□ -0.27
CTSB-230ENST00000534149 XPR1Q9UBH6 696 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms