RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 TRABD2AQ86V40 505 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 KIF18BQ86Y91 864 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 DDIASQ8IXT1 998 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 BANPQ8N9N5 519 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 C9orf106Q8NAJ2 232 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 ZFP28Q8NHY6 868 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 PPCDCQ96CD2 204 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 TSSK3Q96PN8 268 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 FAM111AQ96PZ2 611 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 TM9SF2Q99805 663 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 CCT7Q99832 543 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 SH3GL2Q99962 352 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 DSN1Q9H410 356 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 REEP4Q9H6H4 257 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 MKS1Q9NXB0 559 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 DNAJB12Q9NXW2 375 aaKnown RBP14.02□□□□□ -0.17
CPSF1-211ENST00000533492 TRAF6Q9Y4K3 522 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 SPG11Q96JI7 2443 aa14.02□□□□□ -0.17
CPSF1-211ENST00000533492 TTC36A6NLP5 189 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 ZIC3O60481 467 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 NPHS1O60500 1241 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 SPAG7O75391 227 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 KCNH1O95259 989 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 IL33O95760 270 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 IL18BPO95998 194 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 IFI6P09912 130 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 NUDT17P0C025 328 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 PRPS2P11908 318 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 SDC1P18827 310 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 POU3F2P20265 443 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-211ENST00000533492 CHMP24386 653 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 GABRA3P34903 492 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 LHX2P50458 406 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 PRKAG1P54619 331 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 GAS1P54826 345 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 MANFP55145 182 aaKnown RBP14.01□□□□□ -0.17
CPSF1-211ENST00000533492 VSNL1P62760 191 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 RPL38P63173 70 aaKnown RBP14.01□□□□□ -0.17
CPSF1-211ENST00000533492 STX5Q13190 355 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 RFTN2Q52LD8 501 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-211ENST00000533492 KANK2Q63ZY3 851 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 ANKRD26P1Q6NSI1 321 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 POMZP3Q6PJE2 187 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 RNF165Q6ZSG1 346 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 OR2T11Q8NH01 316 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 CEP70Q8NHQ1 597 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 RNF138Q8WVD3 245 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 WNT2BQ93097 391 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 ZBED6CLQ96FA7 236 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-211ENST00000533492 DOCK7Q96N67 2140 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 ZFP3Q96NJ6 502 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 LMF2Q9BU23 707 aaKnown RBP14.01□□□□□ -0.17
CPSF1-211ENST00000533492 ROPN1BQ9BZX4 212 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-211ENST00000533492 TUBB1Q9H4B7 451 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 PTGES2Q9H7Z7 377 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 ROPN1Q9HAT0 212 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-211ENST00000533492 EQTNQ9NQ60 294 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 CRIM1Q9NZV1 1036 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 BAIAP2L1Q9UHR4 511 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 ABCG2Q9UNQ0 655 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 TMED5Q9Y3A6 229 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 DNAJC15Q9Y5T4 150 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 KIAA1549Q9HCM3 1950 aa14.01□□□□□ -0.17
CPSF1-211ENST00000533492 MPDZO75970 2070 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 CLCA1A8K7I4 914 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 LSM1O15116 133 aaKnown RBP14□□□□□ -0.17
CPSF1-211ENST00000533492 FADS1O60427 444 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 RCBTB2O95199 551 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 PSMG1O95456 288 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 CHRNGP07510 517 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 FGF4P08620 206 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 DDX5P17844 614 aaKnown RBP14□□□□□ -0.17
CPSF1-211ENST00000533492 HK1P19367 917 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 ASMTP46597 345 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 VPS26BQ4G0F5 336 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 FLYWCH1Q4VC44 716 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 ARL13AQ5H913 290 aaPredicted RBP14□□□□□ -0.17
CPSF1-211ENST00000533492 SZRD1Q7Z422 152 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 GRAMD2AQ8IUY3 354 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 CLHC1Q8NHS4 586 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 TCP10LQ8TDR4 215 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 GPR151Q8TDV0 419 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 DUSP19Q8WTR2 217 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 FAM222BQ8WU58 562 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 TWIST2Q8WVJ9 160 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 CIDECQ96AQ7 238 aaPredicted RBP14□□□□□ -0.17
CPSF1-211ENST00000533492 MECRQ9BV79 373 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 POLDIP3Q9BY77 421 aaKnown RBP14□□□□□ -0.17
CPSF1-211ENST00000533492 TBL1XR1Q9BZK7 514 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 ACBD3Q9H3P7 528 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 FAM120CQ9NX05 1096 aaKnown RBP14□□□□□ -0.17
CPSF1-211ENST00000533492 MED11Q9P086 117 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 SLC17A7Q9P2U7 560 aa14□□□□□ -0.17
CPSF1-211ENST00000533492 TEP1Q99973 2627 aaKnown RBP13.99□□□□□ -0.17
CPSF1-211ENST00000533492 TUBAL3A6NHL2 446 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 C17orf51A8MQB3 221 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 TMEM114B3SHH9 223 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 TMEM233B4DJY2 109 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 TBX19O60806 448 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 CTAG2O75638 210 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms