RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 RBM48Q5RL73 367 aaKnown RBP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 ACSM2BQ68CK6 577 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 OR2T5Q6IEZ7 315 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 GRHL2Q6ISB3 625 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 SHQ1Q6PI26 577 aaKnown RBP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 Q6ZPB1 254 aaPredicted RBP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 SLCO4C1Q6ZQN7 724 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 PARP8Q8N3A8 854 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF555Q8NEP9 628 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 OR2T29Q8NH02 315 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 OR56A3Q8NH54 315 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 SUN3Q8TAQ9 357 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 STT3BQ8TCJ2 826 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 FBLIM1Q8WUP2 373 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 RDH12Q96NR8 316 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 SPOCK3Q9BQ16 436 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 TPT1P8Q9HAU6 139 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF304Q9HCX3 659 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 GALNT8Q9NY28 637 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF282Q9UDV7 671 aaPredicted RBP7.66□□□□□ -1.18
NEDD8-207ENST00000533242 C3orf18Q9UK00 162 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 CORINQ9Y5Q5 1042 aa7.66□□□□□ -1.18
NEDD8-207ENST00000533242 IGLV3-12A0A075B6K2 115 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 PRAMEF25A6NGN4 478 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 C19orf84I3L1E1 186 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 BCKDKO14874 412 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 SLC16A6O15403 523 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 SRPX2O60687 465 aaPredicted RBP7.65□□□□□ -1.18
NEDD8-207ENST00000533242 PRAMEF2O60811 474 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 CLDN14O95500 239 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 C1orf105O95561 183 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 OPN1SWP03999 348 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 ANXA4P09525 319 aaPredicted RBP7.65□□□□□ -1.18
NEDD8-207ENST00000533242 ZGLP1P0C6A0 271 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 NPPBP16860 134 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 GSTM2P28161 218 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 MAPK1P28482 360 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 MAP2K4P45985 399 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 TRPC1P48995 793 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 TPD52P55327 224 aaPredicted RBP7.65□□□□□ -1.18
NEDD8-207ENST00000533242 NUP107P57740 925 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 KRTAP10-9P60411 292 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 TBPL1P62380 186 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 CYP27C1Q4G0S4 372 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 KDM4DQ6B0I6 523 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 C2orf73Q8N5S3 287 aaPredicted RBP7.65□□□□□ -1.18
NEDD8-207ENST00000533242 METTL27Q8N6F8 245 aaPredicted RBP7.65□□□□□ -1.18
NEDD8-207ENST00000533242 LINC01555Q8NAE3 123 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 PIK3C3Q8NEB9 887 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 OR2L8Q8NGY9 312 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 CHTF18Q8WVB6 975 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 CIDECQ96AQ7 238 aaPredicted RBP7.65□□□□□ -1.18
NEDD8-207ENST00000533242 C8orf44Q96CB5 159 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 DTNBP1Q96EV8 351 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 TPD52L3Q96J77 140 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 C7orf34Q96L11 122 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 IL17FQ96PD4 163 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 DUSP26Q9BV47 211 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 FUNDC2Q9BWH2 189 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 RIBC2Q9H4K1 309 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 ERVK-18Q9QC07 812 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 SH3BGRL2Q9UJC5 107 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 RUVBL1Q9Y265 456 aaKnown RBP7.65□□□□□ -1.18
NEDD8-207ENST00000533242 NAALAD2Q9Y3Q0 740 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 MAU2Q9Y6X3 613 aa7.65□□□□□ -1.18
NEDD8-207ENST00000533242 PKDREJQ9NTG1 2253 aa7.65□□□□□ -1.19
NEDD8-207ENST00000533242 HYKKA2RU49 373 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 PABPN1LA6NDY0 278 aaKnown RBP7.64□□□□□ -1.19
NEDD8-207ENST00000533242 EVPLLA8MZ36 301 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 J3QRK9 145 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 KPNA5O15131 536 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 UGDHO60701 494 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 RPN2P04844 631 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 MASP1P48740 699 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 HBA1P69905 142 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 KCNJ10P78508 379 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 IL5RAQ01344 420 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 EMX1Q04741 257 aaPredicted RBP7.64□□□□□ -1.19
NEDD8-207ENST00000533242 SRSF11Q05519 484 aaKnown RBP7.64□□□□□ -1.19
NEDD8-207ENST00000533242 C3AR1Q16581 482 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 CBLL1Q75N03 491 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 PIWIL3Q7Z3Z3 882 aaKnown RBP7.64□□□□□ -1.19
NEDD8-207ENST00000533242 BTLAQ7Z6A9 289 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 SIRT6Q8N6T7 355 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 ZFP90Q8TF47 636 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 MUL1Q969V5 352 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 THAP11Q96EK4 314 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 CCDC138Q96M89 665 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 TUBA1CQ9BQE3 449 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 MESP1Q9BRJ9 268 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 MENTQ9BUN1 341 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 SORBS1Q9BX66 1292 aaKnown RBP7.64□□□□□ -1.19
NEDD8-207ENST00000533242 OR51B5Q9H339 312 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 MCCC2Q9HCC0 563 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 PDP1Q9P0J1 537 aaPredicted RBP7.64□□□□□ -1.19
NEDD8-207ENST00000533242 SAMD4AQ9UPU9 718 aaKnown RBP7.64□□□□□ -1.19
NEDD8-207ENST00000533242 ZNF835Q9Y2P0 537 aa7.64□□□□□ -1.19
NEDD8-207ENST00000533242 POLQO75417 2590 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms