RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 OR7A17O14581 309 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 TO15178 435 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 CD5LO43866 347 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 SSX4O60224 188 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 TSPAN2O60636 221 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 BCAS2O75934 225 aaPredicted RBP8.29□□□□□ -1.08
NEDD8-206ENST00000531430 AQP8O94778 261 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 SEMA3DO95025 777 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 SYNGR4O95473 234 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 NTN1O95631 604 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 ALDOAP04075 364 aaKnown RBP8.29□□□□□ -1.08
NEDD8-206ENST00000531430 ATP1B1P05026 303 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 PAX1P15863 534 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 PTNP21246 168 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 SLC6A8P48029 635 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 PCYT1AP49585 367 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 PNLIPRP2P54317 469 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 MRPS22P82650 360 aaKnown RBP8.29□□□□□ -1.08
NEDD8-206ENST00000531430 CALCOCO2Q13137 446 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 TSC22D1Q15714 1073 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 KLC3Q6P597 504 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 COMMD6Q7Z4G1 85 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 MARCH3Q86UD3 253 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 STK32CQ86UX6 486 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 METTL4Q8N3J2 472 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 PTGR2Q8N8N7 351 aaPredicted RBP8.29□□□□□ -1.08
NEDD8-206ENST00000531430 L3MBTL4Q8NA19 623 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 OR2M3Q8NG83 312 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 OR52B6Q8NGF0 335 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 OR9A2Q8NGT5 310 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 SMAP2Q8WU79 429 aaPredicted RBP8.29□□□□□ -1.08
NEDD8-206ENST00000531430 SELENOMQ8WWX9 145 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 NEUROG1Q92886 237 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 CAVIN3Q969G5 261 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 CNRIP1Q96F85 164 aaPredicted RBP8.29□□□□□ -1.08
NEDD8-206ENST00000531430 SLC35A4Q96G79 324 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 HS6ST2Q96MM7 605 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 KCNK17Q96T54 332 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 RHNO1Q9BSD3 238 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 BEX2Q9BXY8 128 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 PLSCR4Q9NRQ2 329 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 FARSBQ9NSD9 589 aaKnown RBP8.29□□□□□ -1.08
NEDD8-206ENST00000531430 ZNF639Q9UID6 485 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 ADAM29Q9UKF5 820 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 EXPH5Q8NEV8 1989 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 PRR14LQ5THK1 2151 aa8.29□□□□□ -1.08
NEDD8-206ENST00000531430 ANK3Q12955 4377 aaKnown RBP8.29□□□□□ -1.08
NEDD8-206ENST00000531430 B4DXG7 233 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 GPRIN2O60269 458 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 NDUFS7O75251 213 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 PDYNP01213 254 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 C2P06681 752 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 CD3EP07766 207 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 SOD3P08294 240 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 CT45A8P0DMV1 189 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 CT45A9P0DMV2 189 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 TCP1P17987 556 aaKnown RBP8.28□□□□□ -1.08
NEDD8-206ENST00000531430 TSPAN8P19075 237 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 TYK2P29597 1187 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 PAFAH1B1P43034 410 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 GAS1P54826 345 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 SRSF2Q01130 221 aaKnown RBP8.28□□□□□ -1.08
NEDD8-206ENST00000531430 BTKQ06187 659 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 ZNF155Q12901 538 aaPredicted RBP8.28□□□□□ -1.08
NEDD8-206ENST00000531430 ACAP2Q15057 778 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 CT45A2Q5DJT8 189 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 STAC2Q6ZMT1 411 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 BEND4Q6ZU67 534 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 C1orf52Q8N6N3 182 aaKnown RBP8.28□□□□□ -1.08
NEDD8-206ENST00000531430 GBP7Q8N8V2 638 aaPredicted RBP8.28□□□□□ -1.08
NEDD8-206ENST00000531430 OR4F6Q8NGB9 312 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 OR6K3Q8NGY3 331 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 RHEBL1Q8TAI7 183 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 TRPC4APQ8TEL6 797 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 FBF1Q8TES7 1133 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 FBXW5Q969U6 566 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 MTBPQ96DY7 904 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 BBS4Q96RK4 519 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 HBEGFQ99075 208 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 LRRC1Q9BTT6 524 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 SLCO5A1Q9H2Y9 848 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 ALG2Q9H553 416 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 GIMAP4Q9NUV9 329 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 NMRK1Q9NWW6 199 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 TAS2R9Q9NYW1 312 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 FLRT3Q9NZU0 649 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 STOML1Q9UBI4 398 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 GDF2Q9UK05 429 aaPredicted RBP8.28□□□□□ -1.08
NEDD8-206ENST00000531430 VDAC3Q9Y277 283 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 ZNF175Q9Y473 711 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 RNF115Q9Y4L5 304 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 AP4B1Q9Y6B7 739 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 PCNX3Q9H6A9 2034 aa8.28□□□□□ -1.08
NEDD8-206ENST00000531430 A0A096LPK6 155 aa8.27□□□□□ -1.09
NEDD8-206ENST00000531430 GNG14A0A1W2PPG7 69 aa8.27□□□□□ -1.09
NEDD8-206ENST00000531430 LINC01387J3KSC0 135 aa8.27□□□□□ -1.09
NEDD8-206ENST00000531430 TP73O15350 636 aa8.27□□□□□ -1.09
NEDD8-206ENST00000531430 ZSCAN12O43309 604 aa8.27□□□□□ -1.09
NEDD8-206ENST00000531430 CXCL13O43927 109 aa8.27□□□□□ -1.09
NEDD8-206ENST00000531430 TMCC2O75069 709 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms