RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 TAGAPQ8N103 731 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 SLC5A8Q8N695 610 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 CHDHQ8NE62 594 aaPredicted RBP17.58■□□□□ 0.41
SMPD1-205ENST00000531303 ASB9Q96DX5 294 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 WDR45Q9Y484 360 aa17.58■□□□□ 0.41
SMPD1-205ENST00000531303 ACOX3O15254 700 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 STX11O75558 287 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 PGM3O95394 542 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 ZIC2O95409 532 aaPredicted RBP17.57■□□□□ 0.4
SMPD1-205ENST00000531303 AK1P00568 194 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 ATP6V1B2P21281 511 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 ABCD3P28288 659 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 KRT20P35900 424 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 RRADP55042 308 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 NRG3P56975 720 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 VEZF1Q14119 521 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 FLOT2Q14254 428 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 INTS11Q5TA45 600 aaKnown RBP17.57■□□□□ 0.4
SMPD1-205ENST00000531303 LRRC74BQ6ZQY2 392 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 PTRH1Q86Y79 214 aaKnown RBP17.57■□□□□ 0.4
SMPD1-205ENST00000531303 SLC34A3Q8N130 599 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 TMEM102Q8N9M5 508 aaPredicted RBP17.57■□□□□ 0.4
SMPD1-205ENST00000531303 FAM13CQ8NE31 585 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 C17orf47Q8NEP4 570 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 OR5M3Q8NGP4 307 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 WDR60Q8WVS4 1066 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 OMA1Q96E52 524 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 HSPBAP1Q96EW2 488 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 ADOQ96SZ5 270 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 QRSL1Q9H0R6 528 aaKnown RBP17.57■□□□□ 0.4
SMPD1-205ENST00000531303 ING2Q9H160 280 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 ZBTB20Q9HC78 741 aaPredicted RBP17.57■□□□□ 0.4
SMPD1-205ENST00000531303 MAGEL2Q9UJ55 1249 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 NINQ8N4C6 2090 aa17.57■□□□□ 0.4
SMPD1-205ENST00000531303 M0QX08 132 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 ACOT8O14734 319 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 TO15178 435 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 ITGA10O75578 1167 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 GCM2O75603 506 aaPredicted RBP17.56■□□□□ 0.4
SMPD1-205ENST00000531303 NADKO95544 446 aaPredicted RBP17.56■□□□□ 0.4
SMPD1-205ENST00000531303 OPN1SWP03999 348 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 CAPNS1P04632 268 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 IL12BP29460 328 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 RNF144AP50876 292 aaPredicted RBP17.56■□□□□ 0.4
SMPD1-205ENST00000531303 AP2B1P63010 937 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 DESI1Q6ICB0 168 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 TYW3Q6IPR3 259 aaKnown RBP17.56■□□□□ 0.4
SMPD1-205ENST00000531303 FRRS1Q6ZNA5 592 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 PROSER1Q86XN7 944 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 SLC30A8Q8IWU4 369 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 METTL25Q8N6Q8 603 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 BHLHE22Q8NFJ8 381 aaPredicted RBP17.56■□□□□ 0.4
SMPD1-205ENST00000531303 BBS10Q8TAM1 723 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 FAM110BQ8TC76 370 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 SLC22A8Q8TCC7 542 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 ZG16BQ96DA0 208 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 LRGUKQ96M69 825 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 NSMCE2Q96MF7 247 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 COL21A1Q96P44 957 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 SLC38A1Q9H2H9 487 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 CALML5Q9NZT1 146 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 ACTR3BQ9P1U1 418 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 MRTO4Q9UKD2 239 aaKnown RBP17.56■□□□□ 0.4
SMPD1-205ENST00000531303 V9GYQ6 96 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 FRYQ5TBA9 3013 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 CNTRLQ7Z7A1 2325 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 A0A0G2JPF8 293 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 HNRNPCL2B2RXH8 293 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 HNRNPCL3B7ZW38 293 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 ALPPP05187 535 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 HNRNPCL4P0DMR1 293 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 KDELR2P33947 212 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 POLE2P56282 527 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 MLF1P58340 268 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 TRAP1Q12931 704 aaKnown RBP17.56■□□□□ 0.4
SMPD1-205ENST00000531303 FXNQ16595 210 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 FLYWCH1Q4VC44 716 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 CRTC2Q53ET0 693 aaPredicted RBP17.56■□□□□ 0.4
SMPD1-205ENST00000531303 IRAK1BP1Q5VVH5 260 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 BROXQ5VW32 411 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 UNQ6494/PRO21346Q6UXR6 183 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 LRRC69Q6ZNQ3 347 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 OR10Q1Q8NGQ4 319 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 PSMF1Q92530 271 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 RASL10BQ96S79 203 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 G6PC3Q9BUM1 346 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 ZNF350Q9GZX5 532 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 LHPPQ9H008 270 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 MUC13Q9H3R2 512 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 FLRT3Q9NZU0 649 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 NPFFR2Q9Y5X5 522 aa17.56■□□□□ 0.4
SMPD1-205ENST00000531303 EXPH5Q8NEV8 1989 aa17.55■□□□□ 0.4
SMPD1-205ENST00000531303 DNAJB5O75953 348 aa17.55■□□□□ 0.4
SMPD1-205ENST00000531303 IL33O95760 270 aa17.55■□□□□ 0.4
SMPD1-205ENST00000531303 ZNF682O95780 498 aa17.55■□□□□ 0.4
SMPD1-205ENST00000531303 SERPINA1P01009 418 aa17.55■□□□□ 0.4
SMPD1-205ENST00000531303 ITPKBP27987 946 aa17.55■□□□□ 0.4
SMPD1-205ENST00000531303 CCL11P51671 97 aa17.55■□□□□ 0.4
SMPD1-205ENST00000531303 PCBP3P57721 371 aaKnown RBP17.55■□□□□ 0.4
SMPD1-205ENST00000531303 FBXW4P57775 412 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms