RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 SENP1Q9P0U3 644 aa10.26□□□□□ -0.77
VPS28-214ENST00000531032 NDRG3Q9UGV2 375 aa10.26□□□□□ -0.77
VPS28-214ENST00000531032 ABCG2Q9UNQ0 655 aa10.26□□□□□ -0.77
VPS28-214ENST00000531032 OR10H1Q9Y4A9 318 aa10.26□□□□□ -0.77
VPS28-214ENST00000531032 ABCA2Q9BZC7 2435 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 NSD1Q96L73 2696 aaPredicted RBP10.25□□□□□ -0.77
VPS28-214ENST00000531032 A0A087WV62 115 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 CCDC151A5D8V7 595 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 SLC22A20A6NK97 555 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 MYO1GB0I1T2 1018 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 CASKO14936 926 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 RIPK2O43353 540 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 FADS1O60427 444 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 COQ9O75208 318 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 SLITRK5O94991 958 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 PSMG1O95456 288 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 ANXA4P09525 319 aaPredicted RBP10.25□□□□□ -0.77
VPS28-214ENST00000531032 PEPDP12955 493 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 TCEA1P23193 301 aaKnown RBP10.25□□□□□ -0.77
VPS28-214ENST00000531032 CPOXP36551 454 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 CLDN15P56746 228 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 FAM27E3Q08E93 113 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 ZNF763Q0D2J5 394 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 ZNF155Q12901 538 aaPredicted RBP10.25□□□□□ -0.77
VPS28-214ENST00000531032 GANABQ14697 944 aaKnown RBP10.25□□□□□ -0.77
VPS28-214ENST00000531032 PRSS53Q2L4Q9 553 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 CYP27C1Q4G0S4 372 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 SHEQ5VZ18 495 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 P4HA3Q7Z4N8 544 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 OR2M3Q8NG83 312 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.25□□□□□ -0.77
VPS28-214ENST00000531032 C18orf12Q96KH6 178 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 KCNA7Q96RP8 456 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 TAS2R7Q9NYW3 318 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 PPP4R1LQ9P1A2 415 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 PSMC3IPQ9P2W1 217 aaPredicted RBP10.25□□□□□ -0.77
VPS28-214ENST00000531032 C19orf53Q9UNZ5 99 aaPredicted RBP10.25□□□□□ -0.77
VPS28-214ENST00000531032 EIF3LQ9Y262 564 aaKnown RBP10.25□□□□□ -0.77
VPS28-214ENST00000531032 TIMM22Q9Y584 194 aa10.25□□□□□ -0.77
VPS28-214ENST00000531032 DEFB108AA8MXU0 73 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 LINC01387J3KSC0 135 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 UPK1AO00322 258 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 SIAH2O43255 324 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 CTIFO43310 598 aaKnown RBP10.24□□□□□ -0.77
VPS28-214ENST00000531032 SCO2O43819 266 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 TNFRSF21O75509 655 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 SMNDC1O75940 238 aaKnown RBP eCLIP10.24□□□□□ -0.77
VPS28-214ENST00000531032 JUNP05412 331 aaKnown RBP10.24□□□□□ -0.77
VPS28-214ENST00000531032 INHBBP09529 407 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 CCKARP32238 428 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 CD79BP40259 229 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 MC3RP41968 323 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 KIR2DL2P43627 348 aaPredicted RBP10.24□□□□□ -0.77
VPS28-214ENST00000531032 NCBP2P52298 156 aaKnown RBP eCLIP10.24□□□□□ -0.775e-6■■□□□ 11.5
VPS28-214ENST00000531032 EEFSECP57772 596 aaKnown RBP10.24□□□□□ -0.77
VPS28-214ENST00000531032 NKX6-1P78426 367 aaPredicted RBP10.24□□□□□ -0.77
VPS28-214ENST00000531032 BTKQ06187 659 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 RAET1LQ5VY80 246 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 FAM71E1Q6IPT2 247 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 VWA1Q6PCB0 445 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 ZNF474Q6S9Z5 364 aaPredicted RBP10.24□□□□□ -0.77
VPS28-214ENST00000531032 TMEM107Q6UX40 140 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 CHMP1BQ7LBR1 199 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 UBQLNLQ8IYU4 475 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 CNPY4Q8N129 248 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 OR2L13Q8N349 312 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 MEIOBQ8N635 442 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 CNEP1R1Q8N9A8 125 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 ACMSDQ8TDX5 336 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 UBLCP1Q8WVY7 318 aaPredicted RBP10.24□□□□□ -0.77
VPS28-214ENST00000531032 WFIKKN1Q96NZ8 548 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 BBS4Q96RK4 519 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 PIP5K1AQ99755 562 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 SMR3AQ99954 134 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 RTN4RQ9BZR6 473 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 DSN1Q9H410 356 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 GSTO2Q9H4Y5 243 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 RNF122Q9H9V4 155 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 MYNNQ9NPC7 610 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 SDHAF3Q9NRP4 125 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 FAM120CQ9NX05 1096 aaKnown RBP10.24□□□□□ -0.77
VPS28-214ENST00000531032 FLRT3Q9NZU0 649 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 GRID1Q9ULK0 1009 aa10.24□□□□□ -0.77
VPS28-214ENST00000531032 H0YC42 278 aa10.23□□□□□ -0.77
VPS28-214ENST00000531032 UBFD1O14562 309 aaKnown RBP10.23□□□□□ -0.77
VPS28-214ENST00000531032 EMC8O43402 210 aa10.23□□□□□ -0.77
VPS28-214ENST00000531032 CGAP01215 116 aa10.23□□□□□ -0.77
VPS28-214ENST00000531032 GSTA1P08263 222 aa10.23□□□□□ -0.77
VPS28-214ENST00000531032 IFI6P09912 130 aa10.23□□□□□ -0.77
VPS28-214ENST00000531032 HK1P19367 917 aa10.23□□□□□ -0.77
VPS28-214ENST00000531032 CRYGSP22914 178 aa10.23□□□□□ -0.77
VPS28-214ENST00000531032 UGT2B10P36537 528 aa10.23□□□□□ -0.77
VPS28-214ENST00000531032 SUCLG1P53597 346 aaKnown RBP10.23□□□□□ -0.77
VPS28-214ENST00000531032 FOXA1P55317 472 aa10.23□□□□□ -0.77
VPS28-214ENST00000531032 TPD52P55327 224 aaPredicted RBP10.23□□□□□ -0.77
VPS28-214ENST00000531032 OCRLQ01968 901 aa10.23□□□□□ -0.77
VPS28-214ENST00000531032 LTBQ06643 244 aa10.23□□□□□ -0.77
VPS28-214ENST00000531032 C2orf80Q0P641 193 aa10.23□□□□□ -0.77
VPS28-214ENST00000531032 GUSBP1Q15486 140 aa10.23□□□□□ -0.77
VPS28-214ENST00000531032 DECR1Q16698 335 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms