RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 GTF2E2P29084 291 aaKnown RBP16.09■□□□□ 0.17
BRCA2-204ENST00000530893 CTHP32929 405 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 TNFSF8P32971 234 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 DUSP8Q13202 625 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 TPBGQ13641 420 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 SHHQ15465 462 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 PLK5Q496M5 336 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 TYW3Q6IPR3 259 aaKnown RBP16.09■□□□□ 0.17
BRCA2-204ENST00000530893 PAQR6Q6TCH4 344 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 RD3Q7Z3Z2 195 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 OR8D4Q8NGM9 314 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 CDS1Q92903 461 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 FAM46AQ96IP4 442 aaKnown RBP16.09■□□□□ 0.17
BRCA2-204ENST00000530893 BMFQ96LC9 184 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 RIPOR3Q96MK2 946 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 MCHR1Q99705 422 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 ANKRA2Q9H9E1 313 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 POLMQ9NP87 494 aaPredicted RBP16.09■□□□□ 0.17
BRCA2-204ENST00000530893 CNIH4Q9P003 139 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 PILRAQ9UKJ1 303 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 SLC22A7Q9Y694 548 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 KLF4O43474 513 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 APOA1P02647 267 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 TSPAN19P0C672 248 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 UGT2B7P16662 529 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 DEFB134Q4QY38 66 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 PRRT3Q5FWE3 981 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 MANEAQ5SRI9 462 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 SETD6Q8TBK2 473 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 TSACCQ96A04 125 aaPredicted RBP16.08■□□□□ 0.16
BRCA2-204ENST00000530893 COL26A1Q96A83 441 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 SLC25A46Q96AG3 418 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 SLC41A3Q96GZ6 507 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 TXNDC15Q96J42 360 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 NELL2Q99435 816 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 MED18Q9BUE0 208 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 BARHL1Q9BZE3 327 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 PIGUQ9H490 435 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 TXNL4BQ9NX01 149 aaKnown RBP16.08■□□□□ 0.16
BRCA2-204ENST00000530893 ENTPD2Q9Y5L3 495 aa16.08■□□□□ 0.16
BRCA2-204ENST00000530893 FAM221BA6H8Z2 402 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 EPOPA6NHQ4 379 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 FRS3O43559 492 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 CTSVO60911 334 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 DLGAP3O95886 979 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 EGFP01133 1207 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 CPMP14384 443 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 EIF2B2P49770 351 aaKnown RBP16.07■□□□□ 0.16
BRCA2-204ENST00000530893 FIGLAQ6QHK4 219 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 GDF7Q7Z4P5 450 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 POGLUT1Q8NBL1 392 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 HTRA1Q92743 480 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 PMM1Q92871 262 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 MRGPRX1Q96LB2 322 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 PRR14Q9BWN1 585 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 TMEM168Q9H0V1 697 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 S1PR5Q9H228 398 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 NKX2-4Q9H2Z4 354 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 C6orf106Q9H6K1 298 aaPredicted RBP16.07■□□□□ 0.16
BRCA2-204ENST00000530893 ACTR10Q9NZ32 417 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 C19orf53Q9UNZ5 99 aaPredicted RBP16.07■□□□□ 0.16
BRCA2-204ENST00000530893 SATB2Q9UPW6 733 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 SPIN1Q9Y657 262 aaPredicted RBP16.07■□□□□ 0.16
BRCA2-204ENST00000530893 SPACA6W5XKT8 324 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 A0A087WV62 115 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 SURF4O15260 269 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 DRD1P21728 446 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 LBX1P52954 281 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 MRPS21P82921 87 aaKnown RBP16.07■□□□□ 0.16
BRCA2-204ENST00000530893 RUNX2Q13950 521 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 FCRL6Q6DN72 434 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 ZCCHC12Q6PEW1 402 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 RANBP3LQ86VV4 465 aaPredicted RBP16.07■□□□□ 0.16
BRCA2-204ENST00000530893 NKAIN4Q8IVV8 208 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 CACTIN-AS1Q8N1I8 211 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 ZNF655Q8N720 491 aaPredicted RBP16.07■□□□□ 0.16
BRCA2-204ENST00000530893 CCL4L1Q8NHW4 92 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 TMCO6Q96DC7 493 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 TRMT61AQ96FX7 289 aaKnown RBP16.07■□□□□ 0.16
BRCA2-204ENST00000530893 ZFYVE21Q9BQ24 234 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 SNTG1Q9NSN8 517 aa16.07■□□□□ 0.16
BRCA2-204ENST00000530893 H0Y8X5 98 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 P2RX6O15547 441 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 RASGRP1O95267 797 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 ATP1B1P05026 303 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 HMGN1P05114 100 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 SRP54P61011 504 aaKnown RBP16.06■□□□□ 0.16
BRCA2-204ENST00000530893 EEF1A1P68104 462 aaKnown RBP16.06■□□□□ 0.16
BRCA2-204ENST00000530893 PSPHP78330 225 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 DUSP5Q16690 384 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 ZNF628Q5EBL2 1059 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 EXOSC6Q5RKV6 272 aaKnown RBP16.06■□□□□ 0.16
BRCA2-204ENST00000530893 AADACL4Q5VUY2 407 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 TMPRSS11AQ6ZMR5 421 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 ZNF620Q6ZNG0 422 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 TRIM73Q86UV7 250 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 TRIM48Q8IWZ4 208 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 ZCCHC10Q8TBK6 192 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 CHAC2Q8WUX2 184 aa16.06■□□□□ 0.16
BRCA2-204ENST00000530893 UFD1Q92890 307 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms