RNA–Protein interactions for RNA: ENST00000530786.5

BDNF-214, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-214ENST00000530786 LGI4Q8N135 537 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 SLC5A8Q8N695 610 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 OR5M3Q8NGP4 307 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 TSLPQ969D9 159 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 PMEPA1Q969W9 287 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 TRIM2Q9C040 744 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 FBXO8Q9NRD0 319 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 SLC6A13Q9NSD5 602 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 RAB26Q9ULW5 256 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 TRBV11-1A0A0K0K1C0 115 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 FITM1A5D6W6 292 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 MAGEA13PA6NCF6 341 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 HMGN4O00479 90 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 IMPDH2P12268 514 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 SDHBP21912 280 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 IDH2P48735 452 aaKnown RBP6.9□□□□□ -1.3
BDNF-214ENST00000530786 MC2RQ01718 297 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 CHRNEQ04844 493 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 TUBA3CQ13748 450 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 EXT1Q16394 746 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 CRB2Q5IJ48 1285 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 CCNJQ5T5M9 372 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 FAM69BQ5VUD6 431 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 SLITRK4Q8IW52 837 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 TEX47Q8TBZ9 253 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 SLC2A12Q8TD20 617 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 ALPK1Q96QP1 1244 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 GPN2Q9H9Y4 310 aaPredicted RBP6.9□□□□□ -1.3
BDNF-214ENST00000530786 SLAMF7Q9NQ25 335 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 UBQLN4Q9NRR5 601 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 OLAHQ9NV23 265 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 CTSFQ9UBX1 484 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 CROCCQ5TZA2 2017 aa6.9□□□□□ -1.3
BDNF-214ENST00000530786 CHD9Q3L8U1 2897 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 ABCB7O75027 752 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 TNFRSF21O75509 655 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 SAGP10523 405 aaPredicted RBP6.9□□□□□ -1.31
BDNF-214ENST00000530786 BMP2P12643 396 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 CCL4P13236 92 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 ISXQ2M1V0 245 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 SWT1Q5T5J6 900 aaKnown RBP6.9□□□□□ -1.31
BDNF-214ENST00000530786 CPEB2Q7Z5Q1 589 aaKnown RBP6.9□□□□□ -1.31
BDNF-214ENST00000530786 OR2L13Q8N349 312 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 LRFN3Q9BTN0 628 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 PTGES2Q9H7Z7 377 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 ANKRA2Q9H9E1 313 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 EMC3Q9P0I2 261 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 ELOA3DA6NLF2 546 aaPredicted RBP6.9□□□□□ -1.31
BDNF-214ENST00000530786 OR6C76A6NM76 312 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 CPSF4LA6NMK7 179 aaKnown RBP6.9□□□□□ -1.31
BDNF-214ENST00000530786 PDLIM1O00151 329 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 HCRTR2O43614 444 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 PPP1R8Q12972 351 aaKnown RBP6.9□□□□□ -1.31
BDNF-214ENST00000530786 TARDBPQ13148 414 aaKnown RBP eCLIP6.9□□□□□ -1.31
BDNF-214ENST00000530786 GK3PQ14409 553 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 DUSP5Q16690 384 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 ELOA3BQ3SY89 546 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 HMGN2P46Q86SG4 172 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 CALHM3Q86XJ0 350 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 KBTBD2Q8IY47 623 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 ZSCAN1Q8NBB4 408 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 ELOA3Q8NG57 546 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 SUN5Q8TC36 379 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 SLC38A2Q96QD8 506 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 ZNF300Q96RE9 604 aaPredicted RBP6.9□□□□□ -1.31
BDNF-214ENST00000530786 ADOQ96SZ5 270 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 VN1R1Q9GZP7 353 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 THSD1Q9NS62 852 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 CES1P1Q9UKY3 287 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 FARSAQ9Y285 508 aaKnown RBP6.9□□□□□ -1.31
BDNF-214ENST00000530786 SLC35A3Q9Y2D2 325 aa6.9□□□□□ -1.31
BDNF-214ENST00000530786 FGF5P12034 268 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 ITIH1P19827 911 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 GSTM3P21266 225 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 PPICP45877 212 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 GSSP48637 474 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 ALDH3A2P51648 485 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 GALNT5Q7Z7M9 940 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 OR4K17Q8NGC6 315 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 FAM81AQ8TBF8 368 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 ASB15Q8WXK1 588 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 TMEM234Q8WY98 164 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 UCN3Q969E3 161 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 DACT3Q96B18 629 aaPredicted RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 HSPBAP1Q96EW2 488 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 SLC35A4Q96G79 324 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 IP6K3Q96PC2 410 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 BCL2L10Q9HD36 194 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 RHBDL2Q9NX52 303 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 N6AMT1Q9Y5N5 214 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 SCN8AQ9UQD0 1980 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 NUP214P35658 2090 aaPredicted RBP6.89□□□□□ -1.31
BDNF-214ENST00000530786 COL4A3Q01955 1670 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 TRBV5-3A0A0A0MS03 114 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 PCP4L1A6NKN8 68 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 SYT5O00445 386 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 GMFGO60234 142 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 TFPIP10646 304 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 GP1BBP13224 206 aa6.89□□□□□ -1.31
BDNF-214ENST00000530786 CXCR1P25024 350 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms