RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	MID1	O15344	667 aa		21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	OR5F1	O95221	314 aa		21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	HOXB3	P14651	431 aa	Predicted RBP	21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	CFL1	P23528	166 aa	Known RBP	21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	HTR1F	P30939	366 aa		21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	KIR2DL3	P43628	341 aa		21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	MRPS15	P82914	257 aa	Known RBP	21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	PDGFRL	Q15198	375 aa		21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	PGGHG	Q32M88	737 aa		21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	LHFPL3	Q86UP9	236 aa		21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	SIMC1	Q8NDZ2	872 aa		21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	ATP6V1C2	Q8NEY4	427 aa		21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	OR9A2	Q8NGT5	310 aa		21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	RNF170	Q96K19	258 aa		21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	MARCH7	Q9H992	704 aa		21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	CXXC1	Q9P0U4	656 aa	Predicted RBP	21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	PCDHGB7	Q9Y5F8	929 aa		21.89	■■□□□ 1.1
GSDMD-208	ENST00000528475	HLA-DMA	P28067	261 aa		21.89	■■□□□ 1.09
GSDMD-208	ENST00000528475	SOX18	P35713	384 aa		21.89	■■□□□ 1.09
GSDMD-208	ENST00000528475	KRT33B	Q14525	404 aa		21.89	■■□□□ 1.09
GSDMD-208	ENST00000528475	CLEC12A	Q5QGZ9	265 aa		21.89	■■□□□ 1.09
GSDMD-208	ENST00000528475	MBOAT2	Q6ZWT7	520 aa		21.89	■■□□□ 1.09
GSDMD-208	ENST00000528475	C16orf62	Q7Z3J2	963 aa		21.89	■■□□□ 1.09
GSDMD-208	ENST00000528475	FBXL6	Q8N531	539 aa		21.89	■■□□□ 1.09
GSDMD-208	ENST00000528475	ASCC1	Q8N9N2	400 aa	Known RBP	21.89	■■□□□ 1.09
GSDMD-208	ENST00000528475	SMARCD2	Q92925	531 aa		21.89	■■□□□ 1.09
GSDMD-208	ENST00000528475	ATF6B	Q99941	703 aa		21.89	■■□□□ 1.09
GSDMD-208	ENST00000528475	TRMT61B	Q9BVS5	477 aa	Known RBP	21.89	■■□□□ 1.09
GSDMD-208	ENST00000528475	ZDHHC4	Q9NPG8	344 aa		21.89	■■□□□ 1.09
GSDMD-208	ENST00000528475	APOBEC3B	Q9UH17	382 aa	Known RBP	21.89	■■□□□ 1.09
GSDMD-208	ENST00000528475	NDRG2	Q9UN36	371 aa	Known RBP	21.89	■■□□□ 1.09
GSDMD-208	ENST00000528475	KCNK6	Q9Y257	313 aa		21.89	■■□□□ 1.09
GSDMD-208	ENST00000528475	ZNF780B	Q9Y6R6	833 aa		21.89	■■□□□ 1.09
GSDMD-208	ENST00000528475	TRPM6	Q9BX84	2022 aa		21.88	■■□□□ 1.09
GSDMD-208	ENST00000528475	ERVK-21	P61565	698 aa		21.88	■■□□□ 1.09
GSDMD-208	ENST00000528475	QPRT	Q15274	297 aa		21.88	■■□□□ 1.09
GSDMD-208	ENST00000528475	SLC30A6	Q6NXT4	461 aa		21.88	■■□□□ 1.09
GSDMD-208	ENST00000528475	ZNF620	Q6ZNG0	422 aa		21.88	■■□□□ 1.09
GSDMD-208	ENST00000528475	NRROS	Q86YC3	692 aa		21.88	■■□□□ 1.09
GSDMD-208	ENST00000528475	NKAIN4	Q8IVV8	208 aa		21.88	■■□□□ 1.09
GSDMD-208	ENST00000528475	PEX5L	Q8IYB4	626 aa		21.88	■■□□□ 1.09
GSDMD-208	ENST00000528475	OR4F15	Q8NGB8	312 aa		21.88	■■□□□ 1.09
GSDMD-208	ENST00000528475	LILRB4	Q8NHJ6	448 aa		21.88	■■□□□ 1.09
GSDMD-208	ENST00000528475	KLK6	Q92876	244 aa		21.88	■■□□□ 1.09
GSDMD-208	ENST00000528475	SLX1A	Q9BQ83	275 aa		21.88	■■□□□ 1.09
GSDMD-208	ENST00000528475	NTM	Q9P121	344 aa		21.88	■■□□□ 1.09
GSDMD-208	ENST00000528475	COMMD3	Q9UBI1	195 aa		21.88	■■□□□ 1.09
GSDMD-208	ENST00000528475	MYO10	Q9HD67	2058 aa		21.88	■■□□□ 1.09
GSDMD-208	ENST00000528475	NUMA1	Q14980	2115 aa		21.88	■■□□□ 1.09
GSDMD-208	ENST00000528475	ANTXRL	A6NF34	631 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	DUXA	A6NLW8	204 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	CENPBD1	B2RD01	187 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	ZIC2	O95409	532 aa	Predicted RBP	21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	HMGN1	P05114	100 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	PEBP1	P30086	187 aa	Known RBP	21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	RGS8	P57771	180 aa	Predicted RBP	21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	STXBP1	P61764	594 aa	Known RBP	21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	CST6	Q15828	149 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	C6orf132	Q5T0Z8	1188 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	ZNF425	Q6IV72	752 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	CNIH2	Q6PI25	160 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	PLEKHM3	Q6ZWE6	761 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	GDF7	Q7Z4P5	450 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	GALNT12	Q8IXK2	581 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	ZFP41	Q8N8Y5	198 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	ENKUR	Q8TC29	256 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	MCHR1	Q99705	422 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	EQTN	Q9NQ60	294 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	CDH10	Q9Y6N8	788 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475		A8MV72	311 aa	Predicted RBP	21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	GABRP	O00591	440 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	AGR2	O95994	175 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	THY1	P04216	161 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	CPN2	P22792	545 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	CMPK1	P30085	196 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	EVX1	P49640	407 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	CAV3	P56539	151 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	FGL2	Q14314	439 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	DNAJA4	Q8WW22	397 aa	Predicted RBP	21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	SLC35A4	Q96G79	324 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	SLC41A3	Q96GZ6	507 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	DMRTB1	Q96MA1	342 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	RSPH9	Q9H1X1	276 aa	Predicted RBP	21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	NLGN3	Q9NZ94	848 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	SLC17A4	Q9Y2C5	497 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475	RWDD3	Q9Y3V2	267 aa		21.87	■■□□□ 1.09
GSDMD-208	ENST00000528475		A0A0B4J293	547 aa		21.86	■■□□□ 1.09
GSDMD-208	ENST00000528475	SMIM30	A4D0T7	59 aa		21.86	■■□□□ 1.09
GSDMD-208	ENST00000528475	LAT	O43561	262 aa		21.86	■■□□□ 1.09
GSDMD-208	ENST00000528475	SCO2	O43819	266 aa		21.86	■■□□□ 1.09
GSDMD-208	ENST00000528475	NTN1	O95631	604 aa		21.86	■■□□□ 1.09
GSDMD-208	ENST00000528475	SLC2A2	P11168	524 aa	Predicted RBP	21.86	■■□□□ 1.09
GSDMD-208	ENST00000528475	APEX1	P27695	318 aa	Known RBP	21.86	■■□□□ 1.09
GSDMD-208	ENST00000528475	MAP2K3	P46734	347 aa		21.86	■■□□□ 1.09
GSDMD-208	ENST00000528475	AVPR1B	P47901	424 aa		21.86	■■□□□ 1.09
GSDMD-208	ENST00000528475	RAB8A	P61006	207 aa		21.86	■■□□□ 1.09
GSDMD-208	ENST00000528475	BDH1	Q02338	343 aa		21.86	■■□□□ 1.09
GSDMD-208	ENST00000528475	FAM214A	Q32MH5	1076 aa		21.86	■■□□□ 1.09
GSDMD-208	ENST00000528475	MZT2A	Q6P582	158 aa		21.86	■■□□□ 1.09
GSDMD-208	ENST00000528475	MARCH9	Q86YJ5	346 aa		21.86	■■□□□ 1.09

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms