RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 GCFC2P16383 781 aaKnown RBP5.01□□□□□ -1.61
PCF11-202ENST00000528336 FCGR2BP31994 310 aaPredicted RBP5.01□□□□□ -1.61
PCF11-202ENST00000528336 NPBWR1P48145 328 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 LEPRP48357 1165 aaKnown RBP5.01□□□□□ -1.61
PCF11-202ENST00000528336 CEBPDP49716 269 aaPredicted RBP5.01□□□□□ -1.61
PCF11-202ENST00000528336 PAX9P55771 341 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 DLK1P80370 383 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 CSTF1Q05048 431 aaKnown RBP5.01□□□□□ -1.61
PCF11-202ENST00000528336 TGM3Q08188 693 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 RASGEF1BQ0VAM2 473 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 SSX2Q16385 188 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 PCK2Q16822 640 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 TPD52L1Q16890 204 aaPredicted RBP5.01□□□□□ -1.61
PCF11-202ENST00000528336 CARD17Q5XLA6 110 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 TTC19Q6DKK2 380 aaPredicted RBP5.01□□□□□ -1.61
PCF11-202ENST00000528336 SLC25A47Q6Q0C1 308 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 PRSS55Q6UWB4 352 aaPredicted RBP5.01□□□□□ -1.61
PCF11-202ENST00000528336 TMEM26Q6ZUK4 368 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 BZW1Q7L1Q6 419 aaKnown RBP5.01□□□□□ -1.61
PCF11-202ENST00000528336 KRTAP7-1Q8IUC3 87 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 OFCC1Q8IZS5 231 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 SLC7A5P1Q8MH63 180 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 KRT222Q8N1A0 295 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 TCAIMQ8N3R3 496 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 NECAB1Q8N987 351 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 NOA1Q8NC60 698 aaKnown RBP5.01□□□□□ -1.61
PCF11-202ENST00000528336 OR1L3Q8NH93 324 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 U2AF1L4Q8WU68 220 aaKnown RBP5.01□□□□□ -1.61
PCF11-202ENST00000528336 SMAP2Q8WU79 429 aaPredicted RBP5.01□□□□□ -1.61
PCF11-202ENST00000528336 OR1E3Q8WZA6 343 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 LRRC45Q96CN5 670 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 C4orf36Q96KX1 117 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 TAAR6Q96RI8 345 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 COQ7Q99807 217 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 OPRPNQ99935 248 aaPredicted RBP5.01□□□□□ -1.61
PCF11-202ENST00000528336 SH3GL1Q99961 368 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 ZNF559Q9BR84 538 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 C11orf70Q9BRQ4 267 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 LLPHQ9BRT6 129 aaKnown RBP5.01□□□□□ -1.61
PCF11-202ENST00000528336 NUP58Q9BVL2 599 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 TRPV6Q9H1D0 765 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 AUNIPQ9H7T9 357 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 WDR76Q9H967 626 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 APMAPQ9HDC9 416 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 LZTFL1Q9NQ48 299 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 MAN2C1Q9NTJ4 1040 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 PPP1R3CQ9UQK1 317 aa5.01□□□□□ -1.61
PCF11-202ENST00000528336 MRPS33Q9Y291 106 aaKnown RBP5.01□□□□□ -1.61
PCF11-202ENST00000528336 TAF1LQ8IZX4 1826 aa5□□□□□ -1.61
PCF11-202ENST00000528336 MAGEB16A2A368 324 aa5□□□□□ -1.61
PCF11-202ENST00000528336 RSPH10B2B2RC85 870 aa5□□□□□ -1.61
PCF11-202ENST00000528336 TCP11X1B4DZS4 312 aa5□□□□□ -1.61
PCF11-202ENST00000528336 RRP8O43159 456 aaKnown RBP5□□□□□ -1.61
PCF11-202ENST00000528336 AKR7A2O43488 359 aa5□□□□□ -1.61
PCF11-202ENST00000528336 MAGEC1O60732 1142 aa5□□□□□ -1.61
PCF11-202ENST00000528336 WBP4O75554 376 aaKnown RBP5□□□□□ -1.61
PCF11-202ENST00000528336 ATP6AP2O75787 350 aa5□□□□□ -1.61
PCF11-202ENST00000528336 DUS4LO95620 317 aaKnown RBP5□□□□□ -1.61
PCF11-202ENST00000528336 KRT6AP02538 564 aa5□□□□□ -1.61
PCF11-202ENST00000528336 ANKRD34CP0C6C1 535 aa5□□□□□ -1.61
PCF11-202ENST00000528336 RSPH10BP0C881 870 aa5□□□□□ -1.61
PCF11-202ENST00000528336 PRKACAP17612 351 aa5□□□□□ -1.61
PCF11-202ENST00000528336 EIF2S2P20042 333 aaKnown RBP5□□□□□ -1.61
PCF11-202ENST00000528336 ANXA13P27216 316 aa5□□□□□ -1.61
PCF11-202ENST00000528336 CA8P35219 290 aa5□□□□□ -1.61
PCF11-202ENST00000528336 SYKP43405 635 aa5□□□□□ -1.61
PCF11-202ENST00000528336 CDX1P47902 265 aaPredicted RBP5□□□□□ -1.61
PCF11-202ENST00000528336 VEGFCP49767 419 aa5□□□□□ -1.61
PCF11-202ENST00000528336 GSDMDP57764 484 aa5□□□□□ -1.61
PCF11-202ENST00000528336 SSTP61278 116 aa5□□□□□ -1.61
PCF11-202ENST00000528336 UBE2IP63279 158 aaKnown RBP5□□□□□ -1.61
PCF11-202ENST00000528336 IRX4P78413 519 aa5□□□□□ -1.61
PCF11-202ENST00000528336 FUT7Q11130 342 aa5□□□□□ -1.61
PCF11-202ENST00000528336 TRAP1Q12931 704 aaKnown RBP5□□□□□ -1.61
PCF11-202ENST00000528336 SPANXN2Q5MJ10 180 aa5□□□□□ -1.61
PCF11-202ENST00000528336 LRRC66Q68CR7 880 aa5□□□□□ -1.61
PCF11-202ENST00000528336 NRARPQ7Z6K4 114 aa5□□□□□ -1.61
PCF11-202ENST00000528336 ADGRD2Q7Z7M1 963 aa5□□□□□ -1.61
PCF11-202ENST00000528336 TMEM126BQ8IUX1 230 aa5□□□□□ -1.61
PCF11-202ENST00000528336 LAX1Q8IWV1 398 aa5□□□□□ -1.61
PCF11-202ENST00000528336 EFCAB13Q8IY85 973 aa5□□□□□ -1.61
PCF11-202ENST00000528336 LRRC75A-AS1Q8N1F1 130 aa5□□□□□ -1.61
PCF11-202ENST00000528336 SLC37A3Q8NCC5 494 aa5□□□□□ -1.61
PCF11-202ENST00000528336 ZNF397Q8NF99 534 aaPredicted RBP5□□□□□ -1.61
PCF11-202ENST00000528336 BPIFCQ8NFQ6 507 aa5□□□□□ -1.61
PCF11-202ENST00000528336 OR7A2PQ8NGA2 310 aa5□□□□□ -1.61
PCF11-202ENST00000528336 OR10G8Q8NGN5 311 aa5□□□□□ -1.61
PCF11-202ENST00000528336 CLHC1Q8NHS4 586 aa5□□□□□ -1.61
PCF11-202ENST00000528336 PAQR8Q8TEZ7 354 aa5□□□□□ -1.61
PCF11-202ENST00000528336 ULK4Q96C45 1275 aa5□□□□□ -1.61
PCF11-202ENST00000528336 ZNF486Q96H40 463 aaPredicted RBP5□□□□□ -1.61
PCF11-202ENST00000528336 C4orf45Q96LM5 186 aa5□□□□□ -1.61
PCF11-202ENST00000528336 LINC00479Q96M42 142 aa5□□□□□ -1.61
PCF11-202ENST00000528336 ZNF599Q96NL3 588 aa5□□□□□ -1.61
PCF11-202ENST00000528336 DGCR6LQ9BY27 220 aa5□□□□□ -1.61
PCF11-202ENST00000528336 SYNDIG1Q9H7V2 258 aa5□□□□□ -1.61
PCF11-202ENST00000528336 MED20Q9H944 212 aa5□□□□□ -1.61
PCF11-202ENST00000528336 IL26Q9NPH9 171 aa5□□□□□ -1.61
PCF11-202ENST00000528336 GTSE1Q9NYZ3 720 aa5□□□□□ -1.61
PCF11-202ENST00000528336 DBF4Q9UBU7 674 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms