RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 NOXRED1Q6NXP6 359 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 POMZP3Q6PJE2 187 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 RNF165Q6ZSG1 346 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 IFNEQ86WN2 208 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 SLC44A2Q8IWA5 706 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-212ENST00000527887 RELL2Q8NC24 303 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-212ENST00000527887 NAXEQ8NCW5 288 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 OR7G2Q8NG99 324 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 NINJ1Q92982 152 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 WNT2BQ93097 391 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 ZNF764Q96H86 408 aaPredicted RBP12.91□□□□□ -0.34
CAPN1-212ENST00000527887 EBPLQ9BY08 206 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 HHATLQ9HCP6 504 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 SDHAF3Q9NRP4 125 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 OR10H1Q9Y4A9 318 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 SPG11Q96JI7 2443 aa12.91□□□□□ -0.34
CAPN1-212ENST00000527887 NINQ8N4C6 2090 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 HCFC1P51610 2035 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 FAM221AA4D161 298 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 C2orf72A6NCS6 295 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 RCBTB2O95199 551 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 CREB1P16220 341 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 LSP1P33241 339 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 DSCR4P56555 118 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-212ENST00000527887 CORO7P57737 925 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 GAB1Q13480 694 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 MPP2Q14168 576 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 DAZAP2Q15038 168 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-212ENST00000527887 ZNHIT3Q15649 155 aaPredicted RBP12.9□□□□□ -0.34
CAPN1-212ENST00000527887 FLYWCH1Q4VC44 716 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 NPSR1Q6W5P4 371 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 ADGRE4PQ86SQ3 457 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 TRIM42Q8IWZ5 723 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 C4orf33Q8N1A6 199 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 OR2L13Q8N349 312 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 CCDC63Q8NA47 563 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 SFXN3Q9BWM7 321 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 C3orf14Q9HBI5 128 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 DNAJB12Q9NXW2 375 aaKnown RBP12.9□□□□□ -0.34
CAPN1-212ENST00000527887 JKAMPQ9P055 326 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 ABCG2Q9UNQ0 655 aa12.9□□□□□ -0.34
CAPN1-212ENST00000527887 LINC01387J3KSC0 135 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 RGS14O43566 566 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 PSMG1O95456 288 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 JUNP05412 331 aaKnown RBP12.89□□□□□ -0.35
CAPN1-212ENST00000527887 DHRS4L1P0CG22 281 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 TMIGD3P0DMS9 266 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-212ENST00000527887 NEFHP12036 1026 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 DDX5P17844 614 aaKnown RBP12.89□□□□□ -0.35
CAPN1-212ENST00000527887 GRK2P25098 689 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 ETV4P43268 484 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 CLK3P49761 638 aaKnown RBP12.89□□□□□ -0.35
CAPN1-212ENST00000527887 DGKQP52824 942 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 GAS1P54826 345 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 GNGT1P63211 74 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 PSG6Q00889 435 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 ZNF155Q12901 538 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-212ENST00000527887 GANABQ14697 944 aaKnown RBP12.89□□□□□ -0.35
CAPN1-212ENST00000527887 KIAA0040Q15053 153 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 DECR1Q16698 335 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 DCST1Q5T197 706 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 ZZZ3Q8IYH5 903 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 GOT1L1Q8NHS2 421 aaPredicted RBP12.89□□□□□ -0.35
CAPN1-212ENST00000527887 RAB3IL1Q8TBN0 382 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 TCP10LQ8TDR4 215 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 CKAP2Q8WWK9 683 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 ELP4Q96EB1 424 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 AMDHD1Q96NU7 426 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 GLIPR2Q9H4G4 154 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 ANKRA2Q9H9E1 313 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 Q9N2J8 555 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 RASSF1Q9NS23 344 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 DDX18Q9NVP1 670 aaKnown RBP12.89□□□□□ -0.35
CAPN1-212ENST00000527887 C1orf109Q9NX04 203 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 CRIM1Q9NZV1 1036 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 CBLCQ9ULV8 474 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 TMED5Q9Y3A6 229 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 CCL27Q9Y4X3 112 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 F8P00451 2351 aa12.89□□□□□ -0.35
CAPN1-212ENST00000527887 MAP1AP78559 2803 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-212ENST00000527887 A6NNC1 897 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 H0Y3Z8 333 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 UPK1AO00322 258 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 BIRC5O15392 142 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 ZIC3O60481 467 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 TBX19O60806 448 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 TRIM13O60858 407 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 SEC22BO75396 215 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 CHEK2O96017 543 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 EPXP11678 715 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 DPP4P27487 766 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 DNAJA1P31689 397 aaKnown RBP12.88□□□□□ -0.35
CAPN1-212ENST00000527887 EVI2BP34910 448 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 MC3RP41968 323 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 LHX2P50458 406 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 WDR4P57081 412 aaKnown RBP12.88□□□□□ -0.35
CAPN1-212ENST00000527887 EEFSECP57772 596 aaKnown RBP12.88□□□□□ -0.35
CAPN1-212ENST00000527887 GUCY1A3Q02108 690 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 HHATQ5VTY9 493 aa12.88□□□□□ -0.35
CAPN1-212ENST00000527887 FAM219BQ5XKK7 198 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms