RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 EGLN3Q9H6Z9 239 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 CPNE5Q9HCH3 593 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 ISYNA1Q9NPH2 558 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 CD93Q9NPY3 652 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 KLHL3Q9UH77 587 aa14.35□□□□□ -0.11
USH1C-207ENST00000527720 C19orf53Q9UNZ5 99 aaPredicted RBP14.35□□□□□ -0.11
USH1C-207ENST00000527720 A0A087WV62 115 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 TMEM129A0AVI4 362 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 HYKKA2RU49 373 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 C2orf74A8MZ97 194 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 KDM4EB2RXH2 506 aaPredicted RBP14.34□□□□□ -0.11
USH1C-207ENST00000527720 BOLA2-SMG1P6H3BVE0 249 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 MYL12AP19105 171 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 SOX3P41225 446 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 CRYBB2P43320 205 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 AVPR1BP47901 424 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 TCEA2Q15560 299 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 ZNF628Q5EBL2 1059 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 DGLUCYQ7Z3D6 616 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 SLC22A16Q86VW1 577 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 CLIP4Q8N3C7 705 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 SLC9A6Q92581 669 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 ASPNQ9BXN1 380 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 PIGUQ9H490 435 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 KRCC1Q9NPI7 259 aaPredicted RBP14.34□□□□□ -0.11
USH1C-207ENST00000527720 MED17Q9NVC6 651 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 CHCHD3Q9NX63 227 aaKnown RBP14.34□□□□□ -0.11
USH1C-207ENST00000527720 SATB2Q9UPW6 733 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 C10orf142B7Z368 130 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 ZNF670-ZNF695F2Z2N8 137 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 FRS3O43559 492 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 ATP1B1P05026 303 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 CPEP16870 476 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 GAS1P54826 345 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 SIM1P81133 766 aaPredicted RBP14.34□□□□□ -0.11
USH1C-207ENST00000527720 BNC1Q01954 994 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 KRR1Q13601 381 aaKnown RBP14.34□□□□□ -0.11
USH1C-207ENST00000527720 SPANXN2Q5MJ10 180 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 EXOSC6Q5RKV6 272 aaKnown RBP14.34□□□□□ -0.11
USH1C-207ENST00000527720 ZCCHC12Q6PEW1 402 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 TMEM92Q6UXU6 159 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 MBOAT2Q6ZWT7 520 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 CCDC190Q86UF4 302 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 PHC2Q8IXK0 858 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 GALNT6Q8NCL4 622 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 OR8D4Q8NGM9 314 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 OR10G6Q8NH81 332 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 BAHD1Q8TBE0 780 aaPredicted RBP14.34□□□□□ -0.11
USH1C-207ENST00000527720 GPBAR1Q8TDU6 330 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 SLC41A3Q96GZ6 507 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 FAM46AQ96IP4 442 aaKnown RBP14.34□□□□□ -0.11
USH1C-207ENST00000527720 SDF2Q99470 211 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 EXOSC4Q9NPD3 245 aaKnown RBP14.34□□□□□ -0.11
USH1C-207ENST00000527720 ABCB10Q9NRK6 738 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 IL20Q9NYY1 176 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 NLGN3Q9NZ94 848 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 SSR3Q9UNL2 185 aa14.34□□□□□ -0.11
USH1C-207ENST00000527720 EXOSC1Q9Y3B2 195 aaKnown RBP14.34□□□□□ -0.11
USH1C-207ENST00000527720 OR5K4A6NMS3 321 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 LOC110117498-PIK3R3F6TDL0 507 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 KLF4O43474 513 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 TNFP01375 233 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 RABIFP47224 123 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 WNT4P56705 351 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 SNRPNP63162 240 aaKnown RBP14.33□□□□□ -0.12
USH1C-207ENST00000527720 DNASE1L3Q13609 305 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 DUSP5Q16690 384 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 FHL5Q5TD97 284 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 Q6ZSR6 202 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 RNF44Q7L0R7 432 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 GDF7Q7Z4P5 450 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 CLDN22Q8N7P3 220 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 ANKK1Q8NFD2 765 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 FLCNQ8NFG4 579 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 PIK3R3Q92569 461 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 PMM1Q92871 262 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 RFKQ969G6 155 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 NECTIN4Q96NY8 510 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 CNPPD1Q9BV87 410 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 PRR14Q9BWN1 585 aa14.33□□□□□ -0.12
USH1C-207ENST00000527720 MN1Q10571 1320 aaPredicted RBP14.33□□□□□ -0.12
USH1C-207ENST00000527720 H0YGG7 62 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 STK25O00506 426 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 TBX1O43435 398 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 PLOD3O60568 738 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 RPS4Y1P22090 263 aaKnown RBP14.32□□□□□ -0.12
USH1C-207ENST00000527720 ETV5P41161 510 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 MTNR1AP48039 350 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 ETV1P50549 477 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 ARF3P61204 181 aaPredicted RBP14.32□□□□□ -0.12
USH1C-207ENST00000527720 COPZ1P61923 177 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 EEF1A1P68104 462 aaKnown RBP14.32□□□□□ -0.12
USH1C-207ENST00000527720 ZNF836Q6ZNA1 936 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 ABI3BPQ7Z7G0 1075 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 RPLP0P6Q8NHW5 317 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 RNFT2Q96EX2 444 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 STACQ99469 402 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 ZNF350Q9GZX5 532 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 IL21RQ9HBE5 538 aa14.32□□□□□ -0.12
USH1C-207ENST00000527720 DUSP22Q9NRW4 184 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms