RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 FUZQ9BT04 418 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 SPATA5L1Q9BVQ7 753 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 GTPBP2Q9BX10 602 aaKnown RBP11.74□□□□□ -0.53
CAPN1-208ENST00000527323 QRSL1Q9H0R6 528 aaKnown RBP11.74□□□□□ -0.53
CAPN1-208ENST00000527323 SERHL2Q9H4I8 314 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 IL36AQ9UHA7 158 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 RWDD3Q9Y3V2 267 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 COL4A3Q01955 1670 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 A0A1B0GVC2 190 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 A6NIN4 97 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 GLOD5A6NK44 160 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 FRS3O43559 492 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 ERAL1O75616 437 aaKnown RBP11.74□□□□□ -0.53
CAPN1-208ENST00000527323 CTSLP07711 333 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 GAS1P54826 345 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 ZNF805Q5CZA5 627 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 FAM205BPQ63HN1 556 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 VITQ6UXI7 678 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 CD300LDQ6UXZ3 194 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 PRICKLE2Q7Z3G6 844 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 KLHL36Q8N4N3 616 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 FBXO15Q8NCQ5 510 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-208ENST00000527323 OR5AR1Q8NGP9 310 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 HCAR2Q8TDS4 363 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 AIF1LQ9BQI0 150 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 ZCCHC2Q9C0B9 1178 aaKnown RBP11.74□□□□□ -0.53
CAPN1-208ENST00000527323 ISYNA1Q9NPH2 558 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 MAN2C1Q9NTJ4 1040 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 TEX10Q9NXF1 929 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-208ENST00000527323 IL20RAQ9UHF4 553 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 ZNF222Q9UK12 451 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 A0A087WUU8 490 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 H7BY64 318 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 K7ESM1 405 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 AKAP8O43823 692 aaKnown RBP11.73□□□□□ -0.53
CAPN1-208ENST00000527323 ADH5P11766 374 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 IFNGR2P38484 337 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 SLC30A6Q6NXT4 461 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 DPPA4Q7L190 304 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 KLBQ86Z14 1044 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 NATD1Q8N6N6 113 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 PLA2G15Q8NCC3 412 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 OR4M1Q8NGD0 313 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 SPRYD4Q8WW59 207 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-208ENST00000527323 RAD51AP1Q96B01 352 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 NACC2Q96BF6 587 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 MRPL38Q96DV4 380 aaKnown RBP11.73□□□□□ -0.53
CAPN1-208ENST00000527323 PPP1R16AQ96I34 528 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 FAM46AQ96IP4 442 aaKnown RBP11.73□□□□□ -0.53
CAPN1-208ENST00000527323 HYLS1Q96M11 299 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 PRAP1Q96NZ9 151 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 BBS4Q96RK4 519 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 FAM83CQ9BQN1 747 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 MED28Q9H204 178 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 SLC23A1Q9UHI7 598 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 NCKAP1Q9Y2A7 1128 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 TCF20Q9UGU0 1960 aaKnown RBP11.73□□□□□ -0.53
CAPN1-208ENST00000527323 ATG2AQ2TAZ0 1938 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 SHISA3A0PJX4 238 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 CPSF4LA6NMK7 179 aaKnown RBP11.73□□□□□ -0.53
CAPN1-208ENST00000527323 FABP7O15540 132 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 NTN1O95631 604 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 BSGP35613 385 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 TALDO1P37837 337 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 RAB8AP61006 207 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 DSG2Q14126 1118 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 LASP1Q14847 261 aaKnown RBP11.73□□□□□ -0.53
CAPN1-208ENST00000527323 ENTPD8Q5MY95 495 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 BICRALQ6AI39 1079 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 LAMTOR1Q6IAA8 161 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 KIAA1211LQ6NV74 962 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 KRT74Q7RTS7 529 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 LRRC56Q8IYG6 542 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-208ENST00000527323 LRRC17Q8N6Y2 441 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 MORN4Q8NDC4 146 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 OR4M2Q8NGB6 313 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 ANGPTL6Q8NI99 470 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 GNPDA2Q8TDQ7 276 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 KLK6Q92876 244 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 DACT3Q96B18 629 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-208ENST00000527323 PRRC1Q96M27 445 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 SECISBP2Q96T21 854 aaKnown RBP11.73□□□□□ -0.53
CAPN1-208ENST00000527323 SOSTQ9BQB4 213 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 TEX12Q9BXU0 123 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 CUEDC1Q9NWM3 386 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-208ENST00000527323 MAT2BQ9NZL9 334 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 ING4Q9UNL4 249 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 SATB2Q9UPW6 733 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 HELZP42694 1942 aaKnown RBP11.73□□□□□ -0.53
CAPN1-208ENST00000527323 TRAV6A0A075B6T7 132 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 TMPRSS11DO60235 418 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 UBXN7O94888 489 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 HLA-DQB1P01920 261 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 STATHP02808 62 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 ELK1P19419 428 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 LTBRP36941 435 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 NCBP2P52298 156 aaKnown RBP eCLIP11.73□□□□□ -0.53
CAPN1-208ENST00000527323 PCBP4P57723 403 aaKnown RBP11.73□□□□□ -0.53
CAPN1-208ENST00000527323 WDR45BQ5MNZ6 344 aa11.73□□□□□ -0.53
CAPN1-208ENST00000527323 ANKRD54Q6NXT1 300 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms