RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 CYP4Z2PQ8N1L4 340 aa12.63□□□□□ -0.39
CD44-224ENST00000526669 ARMC10Q8N2F6 343 aa12.63□□□□□ -0.39
CD44-224ENST00000526669 RNF148Q8N7C7 305 aa12.63□□□□□ -0.39
CD44-224ENST00000526669 OR10G3Q8NGC4 313 aa12.63□□□□□ -0.39
CD44-224ENST00000526669 NFKBIDQ8NI38 313 aa12.63□□□□□ -0.39
CD44-224ENST00000526669 SPACA9Q96E40 222 aaPredicted RBP12.63□□□□□ -0.39
CD44-224ENST00000526669 ABHD17AQ96GS6 310 aa12.63□□□□□ -0.39
CD44-224ENST00000526669 SIGLEC12Q96PQ1 595 aa12.63□□□□□ -0.39
CD44-224ENST00000526669 ADOQ96SZ5 270 aa12.63□□□□□ -0.39
CD44-224ENST00000526669 SMAD5Q99717 465 aaKnown RBP12.63□□□□□ -0.39
CD44-224ENST00000526669 HOPXQ9BPY8 73 aaPredicted RBP12.63□□□□□ -0.39
CD44-224ENST00000526669 UTP23Q9BRU9 249 aaKnown RBP12.63□□□□□ -0.39
CD44-224ENST00000526669 KAT8Q9H7Z6 458 aaKnown RBP12.63□□□□□ -0.39
CD44-224ENST00000526669 ADA2Q9NZK5 511 aa12.63□□□□□ -0.39
CD44-224ENST00000526669 P2RX2Q9UBL9 471 aa12.63□□□□□ -0.39
CD44-224ENST00000526669 BSNQ9UPA5 3926 aa12.63□□□□□ -0.39
CD44-224ENST00000526669 ZGRF1Q86YA3 2104 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 C15orf38-AP3S2A0A0A6YYH1 394 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 EBAG9O00559 213 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 ASNA1O43681 348 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 ZIC2O95409 532 aaPredicted RBP12.62□□□□□ -0.39
CD44-224ENST00000526669 H6PDO95479 791 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 IL33O95760 270 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 CHRM4P08173 479 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 ARAFP10398 606 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 CD96P40200 585 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 CASRP41180 1078 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 CD97P48960 835 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 HLCSP50747 726 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 MNAT1P51948 309 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 BNIP1Q12981 228 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 MAPK11Q15759 364 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 ARHGAP11BQ3KRB8 267 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 CYP27C1Q4G0S4 372 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 BICRALQ6AI39 1079 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 HEPHL1Q6MZM0 1159 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 CCDC121Q6ZUS5 278 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 ARPINQ7Z6K5 226 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 PTOV1Q86YD1 416 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 ZZZ3Q8IYH5 903 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 SLC15A4Q8N697 577 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 CHDHQ8NE62 594 aaPredicted RBP12.62□□□□□ -0.39
CD44-224ENST00000526669 CATSPER1Q8NEC5 780 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 TTC9Q92623 222 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 TMEM19Q96HH6 336 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 COL21A1Q96P44 957 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 NODALQ96S42 347 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 SDF2Q99470 211 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 SH3GL1Q99961 368 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 MFRPQ9BY79 579 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 HES7Q9BYE0 225 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.62□□□□□ -0.39
CD44-224ENST00000526669 RUBCNLQ9H714 662 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 ZNF71Q9NQZ8 489 aaPredicted RBP12.62□□□□□ -0.39
CD44-224ENST00000526669 LRFN1Q9P244 771 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 MKLN1Q9UL63 735 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 PCDHGB3Q9Y5G1 929 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 PCDHGA9Q9Y5G4 932 aaKnown RBP12.62□□□□□ -0.39
CD44-224ENST00000526669 NBEAQ8NFP9 2946 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 GTF3C1Q12789 2109 aa12.62□□□□□ -0.39
CD44-224ENST00000526669 OR5H15A6NDH6 313 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 G3V3Y1 287 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 ICOSLGO75144 302 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 UTS2O95399 124 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 AGR2O95994 175 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 CCL3P10147 92 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 BMP2P12643 396 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 ATP6V1C1P21283 382 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 CYB561P49447 251 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 TMED10P49755 219 aaKnown RBP12.61□□□□□ -0.39
CD44-224ENST00000526669 GSK3BP49841 420 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 GZMMP51124 257 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 HPCAP84074 193 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 CHRNEQ04844 493 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 LIPEQ05469 1076 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 SCARB2Q14108 478 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 OR1C1Q15619 314 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 GPR68Q15743 365 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 ADRM1Q16186 407 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 NTRK2Q16620 822 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 ZNF791Q3KP31 576 aaPredicted RBP12.61□□□□□ -0.39
CD44-224ENST00000526669 GRAMD1BQ3KR37 738 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 PRAMEF20Q5VT98 475 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 SPINK14Q6IE38 97 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 FRRS1Q6ZNA5 592 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 MDGA2Q7Z553 956 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 ZNF227Q86WZ6 799 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 CALHM3Q86XJ0 350 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 FAM110BQ8TC76 370 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 DIO2Q92813 273 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 HGDQ93099 445 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 SLC7A6OSQ96CW6 309 aaPredicted RBP12.61□□□□□ -0.39
CD44-224ENST00000526669 CDRT15Q96T59 188 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 SPAG4Q9NPE6 437 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 TAS2R1Q9NYW7 299 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 ABCD2Q9UBJ2 740 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 MRTO4Q9UKD2 239 aaKnown RBP12.61□□□□□ -0.39
CD44-224ENST00000526669 ZNF451Q9Y4E5 1061 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 GMEB1Q9Y692 573 aa12.61□□□□□ -0.39
CD44-224ENST00000526669 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms