RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CASP3P42574 277 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 MEOX1P50221 254 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 RPS26P62854 115 aaKnown RBP11.86□□□□□ -0.51
SMPD1-202ENST00000526280 PMP22Q01453 160 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 UBAP2LQ14157 1087 aaKnown RBP11.86□□□□□ -0.51
SMPD1-202ENST00000526280 PAGE3Q5JUK9 113 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 C6orf10Q5SRN2 563 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 ZNF324BQ6AW86 544 aaPredicted RBP11.86□□□□□ -0.51
SMPD1-202ENST00000526280 TMEM81Q6P7N7 255 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 FAM180AQ6UWF9 173 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 GK5Q6ZS86 529 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 ZNF605Q86T29 641 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 COX18Q8N8Q8 333 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 ZFP62Q8NB50 900 aaPredicted RBP11.86□□□□□ -0.51
SMPD1-202ENST00000526280 OR2M7Q8NG81 312 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 FAR1Q8WVX9 515 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 CDS1Q92903 461 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 EFHD2Q96C19 240 aaPredicted RBP11.86□□□□□ -0.51
SMPD1-202ENST00000526280 NTNG2Q96CW9 530 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 TMCO6Q96DC7 493 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 OTUB1Q96FW1 271 aaPredicted RBP11.86□□□□□ -0.51
SMPD1-202ENST00000526280 RMND5BQ96G75 393 aaPredicted RBP11.86□□□□□ -0.51
SMPD1-202ENST00000526280 SLC35G5Q96KT7 338 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 FRMD6Q96NE9 622 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 OR7D2Q96RA2 312 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 NODALQ96S42 347 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 FAM173AQ9BQD7 235 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 BTBD2Q9BX70 525 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 PAIP1Q9H074 479 aaKnown RBP11.86□□□□□ -0.51
SMPD1-202ENST00000526280 ASF1BQ9NVP2 202 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 PCDHGB3Q9Y5G1 929 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 KCNE3Q9Y6H6 103 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 NBASA2RRP1 2371 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 A0A096LPI6 279 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 PINLYPA6NC86 204 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 H0YHG0 523 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 SLC28A2O43868 658 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 CCDC22O60826 627 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 ANP32DO95626 131 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 KRT75O95678 551 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 CRYABP02511 175 aaKnown RBP11.86□□□□□ -0.51
SMPD1-202ENST00000526280 SNRPB2P08579 225 aaKnown RBP11.86□□□□□ -0.51
SMPD1-202ENST00000526280 CYP4B1P13584 511 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 HOXB9P17482 250 aaPredicted RBP11.86□□□□□ -0.51
SMPD1-202ENST00000526280 PSMD4P55036 377 aaKnown RBP11.86□□□□□ -0.51
SMPD1-202ENST00000526280 CASP9P55211 416 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 POU6F2P78424 691 aaPredicted RBP11.86□□□□□ -0.51
SMPD1-202ENST00000526280 TLE1Q04724 770 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 FOXO1Q12778 655 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 KLF10Q13118 480 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 SNTA1Q13424 505 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMPD1-202ENST00000526280 GTDC1Q4AE62 458 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 TBCELQ5QJ74 424 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 PRAMEF20Q5VT98 475 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 BICRALQ6AI39 1079 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 DNAJC14Q6Y2X3 702 aaPredicted RBP11.86□□□□□ -0.51
SMPD1-202ENST00000526280 POGLUT1Q8NBL1 392 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 OR5D16Q8NGK9 328 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 ZFP90Q8TF47 636 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 RNF138Q8WVD3 245 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 ANGPTL4Q9BY76 406 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 NMUR2Q9GZQ4 415 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 OR51I1Q9H343 314 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 AGPAT4Q9NRZ5 378 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 SLAMF8Q9P0V8 285 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 NDUFAF1Q9Y375 327 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 PCDHB14Q9Y5E9 798 aa11.86□□□□□ -0.51
SMPD1-202ENST00000526280 SHANK1Q9Y566 2161 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 BAHCC1Q9P281 2608 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 SLC22A2O15244 555 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 ASNA1O43681 348 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 TRIM3O75382 744 aaPredicted RBP11.85□□□□□ -0.51
SMPD1-202ENST00000526280 SNX4O95219 450 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 PLA2G2AP14555 144 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 LCN1P31025 176 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 PTGDSP41222 190 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 RFX3P48380 749 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 DNASE1L1P49184 302 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 TXNL4AP83876 142 aaKnown RBP11.85□□□□□ -0.51
SMPD1-202ENST00000526280 BNIP1Q12981 228 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 RNFT1Q5M7Z0 435 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 LRIF1Q5T3J3 769 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 SLC30A6Q6NXT4 461 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 TNFAIP8L2Q6P589 184 aaPredicted RBP11.85□□□□□ -0.51
SMPD1-202ENST00000526280 FIGNL1Q6PIW4 674 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 RNF130Q86XS8 419 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 DPP10Q8N608 796 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 NR4A3Q92570 626 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 DOHHQ9BU89 302 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 G6PC3Q9BUM1 346 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 METTL7AQ9H8H3 244 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 TPT1P8Q9HAU6 139 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 FBXO34Q9NWN3 711 aa11.85□□□□□ -0.51
SMPD1-202ENST00000526280 TUBA8Q9NY65 449 aaPredicted RBP11.85□□□□□ -0.51
SMPD1-202ENST00000526280 LEF1Q9UJU2 399 aaPredicted RBP11.85□□□□□ -0.51
SMPD1-202ENST00000526280 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.85□□□□□ -0.51
SMPD1-202ENST00000526280 SVILO95425 2214 aa11.84□□□□□ -0.51
SMPD1-202ENST00000526280 RP1L1Q8IWN7 2480 aaPredicted RBP11.84□□□□□ -0.51
SMPD1-202ENST00000526280 TRBV5-3A0A0A0MS03 114 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms