RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 STX5Q13190 355 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 GAB1Q13480 694 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 SQLEQ14534 574 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 SLC10A1Q14973 349 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 SF3B4Q15427 424 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 DUSP5Q16690 384 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 HYAL4Q2M3T9 481 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 EIF2S3LQ2VIR3 472 aaKnown RBP4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 TIGD2Q4W5G0 525 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 C4orf17Q53FE4 359 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 WLSQ5T9L3 541 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF324BQ6AW86 544 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 TIGD3Q6B0B8 471 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 FIGNL1Q6PIW4 674 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF621Q6ZSS3 439 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 MAVSQ7Z434 540 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 WDR53Q7Z5U6 358 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 MISPQ8IVT2 679 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 SIAH3Q8IW03 269 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 CLECL1Q8IZS7 167 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 FAM26EQ8N5C1 309 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 TMEM251Q8N6I4 163 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR14L1PQ8NHC6 308 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 PIK3R3Q92569 461 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 CDS1Q92903 461 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 HGDQ93099 445 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 SARAFQ96BY9 339 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 THOC1Q96FV9 657 aaKnown RBP4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 TMEM41AQ96HV5 264 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 CCDC115Q96NT0 180 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 NODALQ96S42 347 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 SLC35A5Q9BS91 424 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 YIPF4Q9BSR8 244 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 HOXD1Q9GZZ0 328 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 DEFB127Q9H1M4 99 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 PIGUQ9H490 435 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 RAD21L1Q9H4I0 556 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF703Q9H7S9 590 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 PTGES2Q9H7Z7 377 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZDHHC11Q9H8X9 412 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 SIRT3Q9NTG7 399 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 DEPPQ9NTK1 212 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 FGFR1OP2Q9NVK5 253 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 TMEM45AQ9NWC5 275 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 GIN1Q9NXP7 522 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 SH3BGRL2Q9UJC5 107 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 DKKL1Q9UK85 242 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 C15orf41Q9Y2V0 281 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 WIF1Q9Y5W5 379 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 CCDC88CQ9P219 2028 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 COL6A6A6NMZ7 2263 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 MGAQ8IWI9 3026 aa4.95□□□□□ -1.62
HMGB1P40-201ENST00000525121 PIEZO2Q9H5I5 2752 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 MED13Q9UHV7 2174 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 C15orf38-AP3S2A0A0A6YYH1 394 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 A0A1B0GTH9 108 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 GXYLT2A0PJZ3 443 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 PINLYPA6NC86 204 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 LRRC3CA6NJW4 275 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 FIGNL2A6NMB9 653 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 C9JVG2 144 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 AQP7O14520 342 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF195O14628 629 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 GNB5O14775 395 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 SNPHO15079 494 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 ANGPT2O15123 496 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 NDUFB5O43674 189 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 SUSD5O60279 629 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 HCN1O60741 890 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 TRIM3O75382 744 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 NME6O75414 186 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 CBR3O75828 277 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 KCNK2O95069 426 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 NGFRP08138 427 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 STSP08842 583 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 ENDOUP21128 410 aaKnown RBP4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 MATN1P21941 496 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 PPIBP23284 216 aaKnown RBP4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 SOX18P35713 384 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 MDH1P40925 334 aaKnown RBP4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 CA7P43166 264 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 TRPC1P48995 793 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 MRPL19P49406 292 aaKnown RBP4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 SMSP52788 366 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 DGKQP52824 942 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 ARFIP2P53365 341 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 GUCY1A3Q02108 690 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 C17orf67Q0P5P2 114 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 FOXO1Q12778 655 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 RCAN2Q14206 197 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 GNA13Q14344 377 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 GANABQ14697 944 aaKnown RBP4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 MAPRE2Q15555 327 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF630Q2M218 657 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 FLYWCH1Q4VC44 716 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 AGKQ53H12 422 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 CMPK2Q5EBM0 449 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 RNFT1Q5M7Z0 435 aa4.94□□□□□ -1.62
HMGB1P40-201ENST00000525121 DCST2Q5T1A1 773 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms