RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 SDF2Q99470 211 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 TREX2Q9BQ50 279 aaPredicted RBP14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 TRIM15Q9C019 465 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 ZNF350Q9GZX5 532 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 RUBCNLQ9H714 662 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 CACYBPQ9HB71 228 aaKnown RBP14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 ACTR3BQ9P1U1 418 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 WDR45Q9Y484 360 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 FREM2Q5SZK8 3169 aa14.63□□□□□ -0.07
TSPAN4-213ENST00000524895 A0A0G2JPF8 293 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 HNRNPCL2B2RXH8 293 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 HNRNPCL3B7ZW38 293 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 OR2J2O76002 312 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 PDE9AO76083 593 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 PGM3O95394 542 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 HNRNPCL4P0DMR1 293 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 ATP6V1B2P21281 511 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 ABCD3P28288 659 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 MS4A2Q01362 244 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 CHRNEQ04844 493 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 FLYWCH1Q4VC44 716 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 FCRLBQ6BAA4 426 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 UNQ6494/PRO21346Q6UXR6 183 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 CYP2R1Q6VVX0 501 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 FRRS1Q6ZNA5 592 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 LRRC69Q6ZNQ3 347 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 ERMP1Q7Z2K6 904 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 PATL1Q86TB9 770 aaKnown RBP14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 RPS19BP1Q86WX3 136 aaKnown RBP14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 KRT73Q86Y46 540 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 SIRT6Q8N6T7 355 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 EFHD2Q96C19 240 aaPredicted RBP14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 OMA1Q96E52 524 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 NSMCE2Q96MF7 247 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 ZNF607Q96SK3 696 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 LHPPQ9H008 270 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 SLC38A1Q9H2H9 487 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 BCL2L10Q9HD36 194 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 POLE3Q9NRF9 147 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 MKLN1Q9UL63 735 aa14.62□□□□□ -0.07
TSPAN4-213ENST00000524895 ACOT8O14734 319 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 KIAA0513O60268 411 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 FCMRO60667 390 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 ITGA10O75578 1167 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 REM1O75628 298 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 NADKO95544 446 aaPredicted RBP14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 IL33O95760 270 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 IGKV1D-16P01601 117 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 KDELR2P33947 212 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 TMED10P49755 219 aaKnown RBP14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 PCBP3P57721 371 aaKnown RBP14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 MLF1P58340 268 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 GPR68Q15743 365 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 DEFB109BQ30KR1 87 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 TYW3Q6IPR3 259 aaKnown RBP14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 LCN8Q6JVE9 175 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 CCDC80Q76M96 950 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 ZNF619Q8N2I2 560 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 GALNT16Q8N428 558 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 SLC15A4Q8N697 577 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 FAM13CQ8NE31 585 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 BHLHE22Q8NFJ8 381 aaPredicted RBP14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 FAM110BQ8TC76 370 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 SLC26A7Q8TE54 656 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 DIO2Q92813 273 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 COL21A1Q96P44 957 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 RASL10BQ96S79 203 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 ING2Q9H160 280 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 CDCP1Q9H5V8 836 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 GORASP2Q9H8Y8 452 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 FBXO34Q9NWN3 711 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 TEKT2Q9UIF3 430 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 SSUH2Q9Y2M2 353 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 RAXQ9Y2V3 346 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 YARS2Q9Y2Z4 477 aaKnown RBP14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 NPFFR2Q9Y5X5 522 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 DSPPQ9NZW4 1301 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 ASPMQ8IZT6 3477 aa14.61□□□□□ -0.07
TSPAN4-213ENST00000524895 C1QTNF9BB2RNN3 333 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 HS6ST1O60243 411 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 SERPINB7O75635 380 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 PPM1BO75688 479 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 ZIC2O95409 532 aaPredicted RBP14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 SERPINA1P01009 418 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 IFNA14P01570 189 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 CAPNS1P04632 268 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 ALPPP05187 535 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 GUSBP08236 651 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 C1QTNF9P0C862 333 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 ETS2P15036 469 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 SSR4P51571 173 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 TLE3Q04726 772 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 MEP1AQ16819 746 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 MTX3Q5HYI7 312 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 H3F3CQ6NXT2 135 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 SPPL2CQ8IUH8 684 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 ARMC10Q8N2F6 343 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 SPPL2AQ8TCT8 520 aa14.6□□□□□ -0.07
TSPAN4-213ENST00000524895 ZNF354BQ96LW1 612 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms