RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SAMD12Q8N8I0 201 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 OR2A12Q8NGT7 310 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 EVA1AQ9H8M9 152 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 EXTL2Q9UBQ6 330 aa15.36■□□□□ 0.05
PCDHA3-201ENST00000522353 HSD17B1P14061 328 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 ABOP16442 354 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 GRK1Q15835 563 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 ULBP3Q9BZM4 244 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 ATG5Q9H1Y0 275 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 GPN2Q9H9Y4 310 aaPredicted RBP15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 EMC3Q9P0I2 261 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 LHX3Q9UBR4 397 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 GPR160Q9UJ42 338 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 VDAC3Q9Y277 283 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 PCDHA9Q9Y5H5 950 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 J3QRK9 145 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 PLATP00750 562 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 GGT1P19440 569 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 CCR7P32248 378 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 CD83Q01151 205 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 CEACAM7Q14002 265 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 ANKRD33Q7Z3H0 272 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 WDR20Q8TBZ3 569 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 FRS2Q8WU20 508 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 PTERQ96BW5 349 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 NTMT1Q9BV86 223 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 POTEKPQ9BYX7 375 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 AURKAO14965 403 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 RRP8O43159 456 aaKnown RBP15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 SCRG1O75711 98 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 C1orf105O95561 183 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 ACPPP15309 386 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 ELK4P28324 431 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 NADSYN1Q6IA69 706 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 SYCE2Q6PIF2 218 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 ARRDC2Q8TBH0 407 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 RFT1Q96AA3 541 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 MARCH5Q9NX47 278 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 NXT1Q9UKK6 140 aaKnown RBP15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 ZNF175Q9Y473 711 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 HIST1H1TP22492 207 aaPredicted RBP15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 AOAHP28039 575 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 DMWDQ09019 674 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 GAREM2Q75VX8 874 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 CNIH3Q8TBE1 160 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 ZNF480Q8WV37 535 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 GATAD2BQ8WXI9 593 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 TMEM185BQ9H7F4 350 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 STARD5Q9NSY2 213 aa15.35■□□□□ 0.05
PCDHA3-201ENST00000522353 RPS17P08708 135 aaKnown RBP15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 PVRP15151 417 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 IVDP26440 423 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 ADH7P40394 386 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 PRR22Q8IZ63 422 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 MFSD8Q8NHS3 518 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 HAVCR2Q8TDQ0 301 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 AKAP1Q92667 903 aaKnown RBP eCLIP15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 FAM46AQ96IP4 442 aaKnown RBP15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 PHF7Q9BWX1 381 aaPredicted RBP15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 PINK1Q9BXM7 581 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 ACTL6BO94805 426 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 PSMA6P60900 246 aaKnown RBP15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 TMEM53Q6P2H8 277 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 CASTOR1Q8WTX7 329 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 ZNF471Q9BX82 626 aaPredicted RBP15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 UCKL1Q9NWZ5 548 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 APOL3O95236 402 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 LCATP04180 440 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 PET100P0DJ07 73 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 MAGEA8P43361 318 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 FAM189BP81408 668 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 GK3PQ14409 553 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 SHHQ15465 462 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 LIPKQ5VXJ0 399 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 LCN8Q6JVE9 175 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 KCTD9Q7L273 389 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 OR9K2Q8NGE7 335 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 FEVQ99581 238 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 LMF2Q9BU23 707 aaKnown RBP15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 SDR39U1Q9NRG7 319 aaPredicted RBP15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 TREX1Q9NSU2 369 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 GSKIPQ9P0R6 139 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 THAP10Q9P2Z0 257 aaPredicted RBP15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 RIMS3Q9UJD0 308 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 TRBV11-1A0A0K0K1C0 115 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 A0A0U1RQS6 177 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 MEGF11A6BM72 1044 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 SNNO75324 88 aaPredicted RBP15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 GPR75O95800 540 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 TNFSF4P23510 183 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 RACK1P63244 317 aaKnown RBP15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 RSU1Q15404 277 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 SPHARQ15513 63 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 TMEM69Q5SWH9 247 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 OR9A4Q8NGU2 314 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 FAM46BQ96A09 425 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 MOCOSQ96EN8 888 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 SCN11AQ9UI33 1791 aa15.34■□□□□ 0.05
PCDHA3-201ENST00000522353 KCNK5O95279 499 aa15.33■□□□□ 0.05
PCDHA3-201ENST00000522353 HMGN2P05204 90 aaKnown RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms