RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 EGLN2Q96KS0 407 aa14.65□□□□□ -0.06
IGHV3-42-201ENST00000520410 AMDHD1Q96NU7 426 aa14.65□□□□□ -0.06
IGHV3-42-201ENST00000520410 RBM24Q9BX46 236 aaKnown RBP14.65□□□□□ -0.06
IGHV3-42-201ENST00000520410 PTGES2Q9H7Z7 377 aa14.65□□□□□ -0.06
IGHV3-42-201ENST00000520410 SIRT5Q9NXA8 310 aa14.65□□□□□ -0.06
IGHV3-42-201ENST00000520410 MED11Q9P086 117 aa14.65□□□□□ -0.06
IGHV3-42-201ENST00000520410 C19orf53Q9UNZ5 99 aaPredicted RBP14.65□□□□□ -0.06
IGHV3-42-201ENST00000520410 ARHGAP21Q5T5U3 1957 aa14.65□□□□□ -0.06
IGHV3-42-201ENST00000520410 APCP25054 2843 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 A0A087WV62 115 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 A6NNC1 897 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 UPK1AO00322 258 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 SPAG7O75391 227 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 CTAG2O75638 210 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 NEFHP12036 1026 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 CPN1P15169 458 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 CD1EP15812 388 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 GABRA3P34903 492 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 DIO3P55073 304 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 DSCR4P56555 118 aaPredicted RBP14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 FOXF2Q12947 444 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 PCLAFQ15004 111 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 GALNT10Q86SR1 603 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 TDRPQ86YL5 185 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 MEIOBQ8N635 442 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 CNEP1R1Q8N9A8 125 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 OR5M1Q8NGP8 315 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 FAM222BQ8WU58 562 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 JADE3Q92613 823 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 CIDECQ96AQ7 238 aaPredicted RBP14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 ELP4Q96EB1 424 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 APOPT1Q96IL0 206 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 ACBD3Q9H3P7 528 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 FLRT3Q9NZU0 649 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 EDARQ9UNE0 448 aa14.64□□□□□ -0.07
IGHV3-42-201ENST00000520410 TRIM13O60858 407 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 PRPS2P11908 318 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 EFNA1P20827 205 aaPredicted RBP14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 DNASE1P24855 282 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 LHX2P50458 406 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 IST1P53990 364 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 MANFP55145 182 aaKnown RBP14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 GFRA1P56159 465 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 SIRPAP78324 504 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 GAB1Q13480 694 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 POU4F3Q15319 338 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 VPS26BQ4G0F5 336 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 CYP27C1Q4G0S4 372 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 MARCH3Q86UD3 253 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 EIF1ADQ8N9N8 165 aaKnown RBP14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 PIK3R3Q92569 461 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 C11orf24Q96F05 449 aaPredicted RBP14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 FAM111AQ96PZ2 611 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 SFXN3Q9BWM7 321 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 GATA5Q9BWX5 397 aaPredicted RBP14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 EML4Q9HC35 981 aaKnown RBP14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 RASSF1Q9NS23 344 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 CCM2LQ9NUG4 571 aaPredicted RBP14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 PLEKHA6Q9Y2H5 1048 aa14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 WBP11Q9Y2W2 641 aaKnown RBP14.63□□□□□ -0.07
IGHV3-42-201ENST00000520410 GXYLT2A0PJZ3 443 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 TMEM233B4DJY2 109 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 UTS2O95399 124 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 PEPDP12955 493 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 HPGDP15428 266 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 CHMP24386 653 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 SH2D5Q6ZV89 423 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 CDC20BQ86Y33 519 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 INTS1Q8N201 2190 aaKnown RBP14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 OR2L13Q8N349 312 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 GATSQ8NAP1 163 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 NUP43Q8NFH3 380 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 OR2M3Q8NG83 312 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 OR2T11Q8NH01 316 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 DUSP19Q8WTR2 217 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 TWIST2Q8WVJ9 160 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 WNT2BQ93097 391 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 ZBED6CLQ96FA7 236 aaPredicted RBP14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 OTUB1Q96FW1 271 aaPredicted RBP14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 ZFP3Q96NJ6 502 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 CCT7Q99832 543 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 MECRQ9BV79 373 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 LIME1Q9H400 295 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 REEP4Q9H6H4 257 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 GALNT8Q9NY28 637 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 BAIAP2L1Q9UHR4 511 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 ABCG2Q9UNQ0 655 aa14.62□□□□□ -0.07
IGHV3-42-201ENST00000520410 SLC22A20A6NK97 555 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 CASKO14936 926 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 SKAP2O75563 359 aaPredicted RBP14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 RCBTB2O95199 551 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 IL33O95760 270 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 IL18BPO95998 194 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 CHRNGP07510 517 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 ZNF708P17019 499 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 DDX5P17844 614 aaKnown RBP14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 SDC1P18827 310 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 ALDH3A1P30838 453 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 HPCAL1P37235 193 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 KCNJ5P48544 419 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms