RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 LRMDAQ9H2I8 198 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 PRORYQ9H606 182 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 CALML5Q9NZT1 146 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 CD300AQ9UGN4 299 aa16.4■□□□□ 0.22
SDC2-205ENST00000520233 PRORSD1PA6NEY8 169 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 OR6C70A6NIJ9 312 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 SLC28A2O43868 658 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 ABCB7O75027 752 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 STX11O75558 287 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 DNAJC8O75937 253 aaPredicted RBP16.39■□□□□ 0.21
SDC2-205ENST00000520233 OR6B1O95007 311 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 ALPPP05187 535 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 ATP6V1C1P21283 382 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 IL12BP29460 328 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 PCGF2P35227 344 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 HLCSP50747 726 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 CRISP3P54108 245 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 HPCAP84074 193 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 CDK6Q00534 326 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 SCARB2Q14108 478 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 EFR3AQ14156 821 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 VMACQ2NL98 169 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 ZNF791Q3KP31 576 aaPredicted RBP16.39■□□□□ 0.21
SDC2-205ENST00000520233 PRAMEF8Q5VWM4 474 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 PRAMEF7Q5VXH5 474 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 LRRC74BQ6ZQY2 392 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 LINC00696Q6ZRV3 163 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 NUP54Q7Z3B4 507 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 IFNEQ86WN2 208 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 HIPK4Q8NE63 616 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 NFKBIDQ8NI38 313 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 EFHD2Q96C19 240 aaPredicted RBP16.39■□□□□ 0.21
SDC2-205ENST00000520233 SPACA9Q96E40 222 aaPredicted RBP16.39■□□□□ 0.21
SDC2-205ENST00000520233 TMEM19Q96HH6 336 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 COL21A1Q96P44 957 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 SMAD5Q99717 465 aaKnown RBP16.39■□□□□ 0.21
SDC2-205ENST00000520233 KCTD14Q9BQ13 255 aaPredicted RBP16.39■□□□□ 0.21
SDC2-205ENST00000520233 RNF32Q9H0A6 362 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 SAP130Q9H0E3 1048 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 TRIM45Q9H8W5 580 aaPredicted RBP16.39■□□□□ 0.21
SDC2-205ENST00000520233 ZBTB20Q9HC78 741 aaPredicted RBP16.39■□□□□ 0.21
SDC2-205ENST00000520233 FBXO34Q9NWN3 711 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 ZNF451Q9Y4E5 1061 aa16.39■□□□□ 0.21
SDC2-205ENST00000520233 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.39■□□□□ 0.21
SDC2-205ENST00000520233 ACACAQ13085 2346 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 ELOVL7A1L3X0 281 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 C5orf58C9J3I9 102 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 MKRN2OSH3BPM6 223 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 GSC2O15499 205 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 H6PDO95479 791 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 CHRM4P08173 479 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 HSD17B1P14061 328 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 CASRP41180 1078 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 RFX3P48380 749 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 POLE2P56282 527 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 CEACAM7Q14002 265 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 VEZF1Q14119 521 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 NTRK2Q16620 822 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 ZNF468Q5VIY5 522 aaPredicted RBP16.38■□□□□ 0.21
SDC2-205ENST00000520233 REEP3Q6NUK4 255 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 IGFL2Q6UWQ7 119 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 IL20RBQ6UXL0 311 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 ASRGL1Q7L266 308 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 MICU2Q8IYU8 434 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 RNF148Q8N7C7 305 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 TNIP2Q8NFZ5 429 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 PMM1Q92871 262 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 EXTL1Q92935 676 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 HGDQ93099 445 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 CNTNAP3BQ96NU0 1288 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 ADOQ96SZ5 270 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 UTP23Q9BRU9 249 aaKnown RBP16.38■□□□□ 0.21
SDC2-205ENST00000520233 THTPAQ9BU02 230 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 CNTNAP3Q9BZ76 1288 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 SLC38A1Q9H2H9 487 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 BCL2L10Q9HD36 194 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 HPF1Q9NWY4 346 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 GMPR2Q9P2T1 348 aaKnown RBP16.38■□□□□ 0.21
SDC2-205ENST00000520233 PACSIN3Q9UKS6 424 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 USP22Q9UPT9 525 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 ANGPT4Q9Y264 503 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 WDR45Q9Y484 360 aa16.38■□□□□ 0.21
SDC2-205ENST00000520233 A0A0G2JPF8 293 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 HNRNPCL2B2RXH8 293 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 HNRNPCL3B7ZW38 293 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 HS6ST1O60243 411 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 FCMRO60667 390 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 UGT2B11O75310 529 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 PGM3O95394 542 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 ZIC2O95409 532 aaPredicted RBP16.37■□□□□ 0.21
SDC2-205ENST00000520233 WDPCPO95876 746 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 HNRNPCL4P0DMR1 293 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 CYP4B1P13584 511 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 HTR1EP28566 365 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 CD96P40200 585 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 CYB561P49447 251 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 FBXW4P57775 412 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 TUBA3CQ13748 450 aa16.37■□□□□ 0.21
SDC2-205ENST00000520233 TYW3Q6IPR3 259 aaKnown RBP16.37■□□□□ 0.21
SDC2-205ENST00000520233 TUBA3EQ6PEY2 450 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms