RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 SLC5A8Q8N695 610 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 CDS1Q92903 461 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 CTHRC1Q96CG8 243 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 ZG16BQ96DA0 208 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 OR1F2PQ96R84 312 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 FEVQ99581 238 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 SPATA5L1Q9BVQ7 753 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 YTHDF1Q9BYJ9 559 aaKnown RBP13.48□□□□□ -0.25
CLN8-204ENST00000519254 QRSL1Q9H0R6 528 aaKnown RBP13.48□□□□□ -0.25
CLN8-204ENST00000519254 RIBC2Q9H4K1 309 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 MKKSQ9NPJ1 570 aaPredicted RBP13.48□□□□□ -0.25
CLN8-204ENST00000519254 LANCL2Q9NS86 450 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 RLIMQ9NVW2 624 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 KIF17Q9P2E2 1029 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 RHCGQ9UBD6 479 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 CDV3Q9UKY7 258 aaKnown RBP13.48□□□□□ -0.25
CLN8-204ENST00000519254 SATB2Q9UPW6 733 aa13.48□□□□□ -0.25
CLN8-204ENST00000519254 FER1L5A0AVI2 2057 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 A0A1W2PNU3 283 aaPredicted RBP13.47□□□□□ -0.25
CLN8-204ENST00000519254 BLACEA4D250 179 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 MEN1O00255 615 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 TM4SF5O14894 197 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 OR10H2O60403 315 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 CTNSO60931 367 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 SLITRK5O94991 958 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 GADD45GO95257 159 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 BMP10O95393 424 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 LGI1O95970 557 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 CEACAM1P13688 526 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 ELK4P28324 431 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 RORAP35398 523 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 ISL1P61371 349 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 IL1RL1Q01638 556 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 TARDBPQ13148 414 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLN8-204ENST00000519254 DUSP5Q16690 384 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 ZNF691Q5VV52 312 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 LCN10Q6JVE6 187 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 C16orf62Q7Z3J2 963 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 OR10G2Q8NGC3 310 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 VANGL1Q8TAA9 524 aaPredicted RBP13.47□□□□□ -0.25
CLN8-204ENST00000519254 SLC9A6Q92581 669 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 FAM192AQ9GZU8 254 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 CALML5Q9NZT1 146 aa13.47□□□□□ -0.25
CLN8-204ENST00000519254 TRIM64CA6NLI5 447 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 A8MVJ9 347 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 BCKDKO14874 412 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 FCMRO60667 390 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 UGT2B11O75310 529 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 DKK1O94907 266 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 CYP4B1P13584 511 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 AGXTP21549 392 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 EPHA2P29317 976 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 HSD17B7P56937 341 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 OCA2Q04671 838 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 IL18R1Q13478 541 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 EXOSC7Q15024 291 aaKnown RBP13.46□□□□□ -0.25
CLN8-204ENST00000519254 CTU2Q2VPK5 515 aaKnown RBP13.46□□□□□ -0.25
CLN8-204ENST00000519254 MLIPQ5VWP3 458 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 ZNF385CQ66K41 422 aaPredicted RBP13.46□□□□□ -0.25
CLN8-204ENST00000519254 LAIR2Q6ISS4 152 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 FAM199XQ6PEV8 388 aaPredicted RBP13.46□□□□□ -0.25
CLN8-204ENST00000519254 SATL1Q86VE3 508 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 GALNT6Q8NCL4 622 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 WDR36Q8NI36 951 aaKnown RBP13.46□□□□□ -0.25
CLN8-204ENST00000519254 MR1Q95460 341 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 DHRS1Q96LJ7 313 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 PTCHD1Q96NR3 888 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 TAAR9Q96RI9 348 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 PSD2Q9BQI7 771 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 PINK1Q9BXM7 581 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 ALOXE3Q9BYJ1 711 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 AKIRIN1Q9H9L7 192 aaPredicted RBP13.46□□□□□ -0.25
CLN8-204ENST00000519254 NMNAT1Q9HAN9 279 aaPredicted RBP13.46□□□□□ -0.25
CLN8-204ENST00000519254 ADAP2Q9NPF8 381 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 NECTIN3Q9NQS3 549 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 ACAD8Q9UKU7 415 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 MKL2Q9ULH7 1088 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 CLDN16Q9Y5I7 305 aa13.46□□□□□ -0.25
CLN8-204ENST00000519254 RIF1Q5UIP0 2472 aaKnown RBP13.46□□□□□ -0.25
CLN8-204ENST00000519254 M0R3H8 397 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 SLC30A4O14863 429 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 STK17BO94768 372 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 AGR2O95994 175 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 IFNA16P05015 189 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 KLK3P07288 261 aaPredicted RBP13.45□□□□□ -0.26
CLN8-204ENST00000519254 PABPC4LP0CB38 370 aaKnown RBP13.45□□□□□ -0.26
CLN8-204ENST00000519254 CDH2P19022 906 aaPredicted RBP13.45□□□□□ -0.26
CLN8-204ENST00000519254 S1PR1P21453 382 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 RYKP34925 604 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 MAP3K8P41279 467 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 IGLV3-21P80748 117 aaPredicted RBP13.45□□□□□ -0.26
CLN8-204ENST00000519254 CD47Q08722 323 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 EIF3IQ13347 325 aaKnown RBP13.45□□□□□ -0.26
CLN8-204ENST00000519254 RAPSNQ13702 412 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 ARHGAP11BQ3KRB8 267 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 DEF8Q6ZN54 512 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 FRRS1Q6ZNA5 592 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 LAPTM4BQ86VI4 370 aa13.45□□□□□ -0.26
CLN8-204ENST00000519254 CHDHQ8NE62 594 aaPredicted RBP13.45□□□□□ -0.26
CLN8-204ENST00000519254 OR9Q2Q8NGE9 314 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms