RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 LRIT3Q3SXY7 679 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 KCTD21Q4G0X4 260 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 SLC25A30Q5SVS4 291 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 SPATA46Q5T0L3 261 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 DCAF12Q5T6F0 453 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 LEMD1Q68G75 181 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 HIST2H2AA3Q6FI13 130 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 RTL6Q6ICC9 239 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 REG3GQ6UW15 175 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 NANOGNBQ7Z5D8 188 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 KDM8Q8N371 416 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 SFRP1Q8N474 314 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 NEK11Q8NG66 645 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 OR13C2Q8NGS9 318 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 OR4Q3Q8NH05 313 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 OR4A16Q8NH70 328 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 RDH11Q8TC12 318 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 ITLN1Q8WWA0 313 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 EFHD2Q96C19 240 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-207ENST00000518569 RAB39BQ96DA2 213 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 MRPL53Q96EL3 112 aaKnown RBP2.87□□□□□ -1.95
VPS13B-207ENST00000518569 MSANTD3Q96H12 275 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 IFT74Q96LB3 600 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 CXorf58Q96LI9 332 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 COQ7Q99807 217 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 CCT7Q99832 543 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 MTG1Q9BT17 334 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-207ENST00000518569 TPPP3Q9BW30 176 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 FUNDC2Q9BWH2 189 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 CARD6Q9BX69 1037 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 Q9HAA7 133 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 LZTFL1Q9NQ48 299 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 CENPMQ9NSP4 180 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 CLEC5AQ9NY25 188 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 CYP39A1Q9NYL5 469 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 EMC3Q9P0I2 261 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 SPATA7Q9P0W8 599 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 TRIM10Q9UDY6 481 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 TUBGCP4Q9UGJ1 667 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 FETUBQ9UGM5 382 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 ZNF346Q9UL40 294 aaKnown RBP2.87□□□□□ -1.95
VPS13B-207ENST00000518569 DIMT1Q9UNQ2 313 aaKnown RBP2.87□□□□□ -1.95
VPS13B-207ENST00000518569 MRPS7Q9Y2R9 242 aaKnown RBP2.87□□□□□ -1.95
VPS13B-207ENST00000518569 COMMD3-BMI1R4GMX3 469 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 GRIN2BQ13224 1484 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 TTC41PQ6P2S7 1318 aa2.87□□□□□ -1.95
VPS13B-207ENST00000518569 PCF11O94913 1555 aaKnown RBP2.87□□□□□ -1.95
VPS13B-207ENST00000518569 ABCA5Q8WWZ7 1642 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 MAP3K4Q9Y6R4 1608 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 A0A087WWV3 80 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 C15orf38-AP3S2A0A0A6YYH1 394 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 TRBV2A0A0J9YWF9 115 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 GOLGA6L7A0A1B0GV03 622 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 XKRY2A2RUG3 117 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 HSBP1L1C9JCN9 74 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 EEF2KO00418 725 aaKnown RBP2.86□□□□□ -1.95
VPS13B-207ENST00000518569 NVLO15381 856 aaKnown RBP2.86□□□□□ -1.95
VPS13B-207ENST00000518569 YKT6O15498 198 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 CLDN3O15551 220 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 SULT1B1O43704 296 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 SSX5O60225 188 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 NME2P1O60361 137 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 WBP4O75554 376 aaKnown RBP2.86□□□□□ -1.95
VPS13B-207ENST00000518569 CSF2P04141 144 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 FCGR3AP08637 254 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 AREGP15514 252 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 PSMA5P28066 241 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 PPP2R1BP30154 601 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 MDH1P40925 334 aaKnown RBP2.86□□□□□ -1.95
VPS13B-207ENST00000518569 CAMLGP49069 296 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 PRRX1P54821 245 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 GSTO1P78417 241 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 ELP6Q0PNE2 266 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 BNIP1Q12981 228 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 CHIT1Q13231 466 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 PLD1Q13393 1074 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 DDX39BQ13838 428 aaKnown RBP2.86□□□□□ -1.95
VPS13B-207ENST00000518569 CYLC2Q14093 348 aaPredicted RBP2.86□□□□□ -1.95
VPS13B-207ENST00000518569 EXOSC7Q15024 291 aaKnown RBP2.86□□□□□ -1.95
VPS13B-207ENST00000518569 KRT31Q15323 416 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 TPD52L1Q16890 204 aaPredicted RBP2.86□□□□□ -1.95
VPS13B-207ENST00000518569 C17orf58Q2M2W7 97 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 HFEQ30201 348 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 EIPR1Q53HC9 387 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 NHLRC3Q5JS37 347 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 CFAP157Q5JU67 520 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 NKAIN2Q5VXU1 208 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 RNLSQ5VYX0 342 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 PDPK2PQ6A1A2 396 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 CDC42EP5Q6NZY7 148 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 RFWD3Q6PCD5 774 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 MFSD7Q6UXD7 560 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 TOM1L2Q6ZVM7 507 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 UNC5CLQ8IV45 518 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 FAM9CQ8IZT9 166 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 SUMF1Q8NBK3 374 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 LEMD2Q8NC56 503 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 AGAP11Q8TF27 550 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 C14orf79Q96F83 325 aa2.86□□□□□ -1.95
VPS13B-207ENST00000518569 C7orf34Q96L11 122 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms