RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 ACTG2P63267 376 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 GAS6Q14393 721 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 PON3Q15166 354 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 PAQR6Q6TCH4 344 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 LYPD4Q6UWN0 246 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 FAM124AQ86V42 546 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 CCDC71Q8IV32 467 aaPredicted RBP6.28□□□□□ -1.4
CPNE3-203ENST00000517490 VRK3Q8IV63 474 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 CPA6Q8N4T0 437 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 COX18Q8N8Q8 333 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 OR56A3Q8NH54 315 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 GIMAP1Q8WWP7 306 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 PDXPQ96GD0 296 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 TREX2Q9BQ50 279 aaPredicted RBP6.28□□□□□ -1.4
CPNE3-203ENST00000517490 GSX2Q9BZM3 304 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 PELI2Q9HAT8 420 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 MRPS30Q9NP92 439 aaKnown RBP6.28□□□□□ -1.4
CPNE3-203ENST00000517490 TEX10Q9NXF1 929 aaPredicted RBP6.28□□□□□ -1.4
CPNE3-203ENST00000517490 IKZF2Q9UKS7 526 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 WDR45Q9Y484 360 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 FAM25EA8MYX2 175 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 GTPBP1O00178 669 aaKnown RBP6.28□□□□□ -1.4
CPNE3-203ENST00000517490 FZD6O60353 706 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 FZD7O75084 574 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 IGHA2P01877 340 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 S100A6P06703 90 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 ITGB7P26010 798 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 RFX2P48378 723 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 HMGA2P52926 109 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 PER3P56645 1201 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 VSX2P58304 361 aaPredicted RBP6.28□□□□□ -1.4
CPNE3-203ENST00000517490 HOXC5Q00444 222 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 CAP1Q01518 475 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 PUDPQ08623 228 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 TCEA2Q15560 299 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 PGGHGQ32M88 737 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 SMUG1Q53HV7 270 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 TMEM69Q5SWH9 247 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 PXDC1Q5TGL8 231 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 SLC9B2Q86UD5 537 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 TMC8Q8IU68 726 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 NRSN1Q8IZ57 195 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 LSM14AQ8ND56 463 aaKnown RBP6.28□□□□□ -1.4
CPNE3-203ENST00000517490 MOSPD2Q8NHP6 518 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 ZNF480Q8WV37 535 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 ACOT11Q8WXI4 607 aaPredicted RBP6.28□□□□□ -1.4
CPNE3-203ENST00000517490 MYEOVQ96EZ4 313 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 MSLNLQ96KJ4 702 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 FCRL1Q96LA6 429 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 GNG8Q9UK08 70 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 UBL3O95164 117 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 IL33O95760 270 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 KLKB1P03952 638 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 HIST1H2ABP04908 130 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 IMPA1P29218 277 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 CD70P32970 193 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 RBM34P42696 430 aaKnown RBP6.28□□□□□ -1.4
CPNE3-203ENST00000517490 NUBP1P53384 320 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 RAP2BP61225 183 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 MRPS10P82664 201 aaKnown RBP6.28□□□□□ -1.4
CPNE3-203ENST00000517490 BTN1A1Q13410 526 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 OPCMLQ14982 345 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 GPR68Q15743 365 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 C12orf73Q69YU5 71 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 WASH2PQ6VEQ5 465 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 RNF44Q7L0R7 432 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 HIST3H2AQ7L7L0 130 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 PAQR7Q86WK9 346 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 HIST1H2ACQ93077 130 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 SAMD8Q96LT4 415 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 EGLN3Q9H6Z9 239 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 CXorf36Q9H7Y0 433 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 FGF20Q9NP95 211 aaPredicted RBP6.28□□□□□ -1.4
CPNE3-203ENST00000517490 SLC35C2Q9NQQ7 365 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 PCDHB16Q9NRJ7 776 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 ACSS1Q9NUB1 689 aaPredicted RBP6.28□□□□□ -1.4
CPNE3-203ENST00000517490 TAS2R3Q9NYW6 316 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 CKLFQ9UBR5 152 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 PLAGL1Q9UM63 463 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 PLCL2Q9UPR0 1127 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 CSNK1G3Q9Y6M4 447 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 MICAL3Q7RTP6 2002 aa6.28□□□□□ -1.4
CPNE3-203ENST00000517490 KCNE1BA0A087WTH5 132 aa6.27□□□□□ -1.41
CPNE3-203ENST00000517490 ALG1L2C9J202 215 aa6.27□□□□□ -1.41
CPNE3-203ENST00000517490 H7BY64 318 aa6.27□□□□□ -1.41
CPNE3-203ENST00000517490 LEFTY1O75610 366 aa6.27□□□□□ -1.41
CPNE3-203ENST00000517490 SLCO2B1O94956 709 aa6.27□□□□□ -1.41
CPNE3-203ENST00000517490 TGM6O95932 706 aa6.27□□□□□ -1.41
CPNE3-203ENST00000517490 LALBAP00709 142 aa6.27□□□□□ -1.41
CPNE3-203ENST00000517490 TPOP07202 933 aa6.27□□□□□ -1.41
CPNE3-203ENST00000517490 C1SP09871 688 aa6.27□□□□□ -1.41
CPNE3-203ENST00000517490 ZDHHC11BP0C7U3 371 aa6.27□□□□□ -1.41
CPNE3-203ENST00000517490 PXNP49023 591 aaPredicted RBP6.27□□□□□ -1.41
CPNE3-203ENST00000517490 TNK1Q13470 666 aa6.27□□□□□ -1.41
CPNE3-203ENST00000517490 GK2Q14410 553 aaPredicted RBP6.27□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF234Q14588 700 aa6.27□□□□□ -1.41
CPNE3-203ENST00000517490 MBTPS1Q14703 1052 aa6.27□□□□□ -1.41
CPNE3-203ENST00000517490 TMEM35AQ53FP2 167 aa6.27□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF805Q5CZA5 627 aa6.27□□□□□ -1.41
CPNE3-203ENST00000517490 FAM180BQ6P0A1 224 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms