RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 RBBP8Q99708 897 aa-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 RHOXF2Q9BQY4 288 aa-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 SEC22CQ9BRL7 303 aa-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 FAM103A1Q9BTL3 118 aaKnown RBP-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 POLR2J2Q9GZM3 115 aaKnown RBP-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 POLR2J3Q9H1A7 115 aaKnown RBP-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 FAM124BQ9H5Z6 455 aaPredicted RBP-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 ALG9Q9H6U8 611 aa-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 FAM204AQ9H8W3 233 aa-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 GPATCH2LQ9NWQ4 482 aa-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 SLC25A37Q9NYZ2 338 aa-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 ANKMY1Q9P2S6 941 aa-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 TRPC4Q9UBN4 977 aa-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 SEC14L4Q9UDX3 406 aa-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 NENFQ9UMX5 172 aa-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 TRAPPC4Q9Y296 219 aa-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 ANKRD6Q9Y2G4 727 aa-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 HECTD1Q9ULT8 2610 aa-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 TNS2Q63HR2 1409 aa-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 ADGRA3Q8IWK6 1321 aa-1.92□□□□□ -2.72
SNORA40.16-201ENST00000517238 MYOFQ9NZM1 2061 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 A0A0A6YYD4 124 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 A0A1B0GUL7 405 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 A0A1W2PNM2 257 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 ZNF732B4DXR9 585 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 MANBAO00462 879 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 KPNA5O15131 536 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 NUDT14O95848 222 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 GH2P01242 217 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 H2AFZP0C0S5 128 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 CLDN15P56746 228 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 PTENP60484 403 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 RAP1AP62834 184 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 TSPY1Q01534 308 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 BIKQ13323 160 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 ARHGAP29Q52LW3 1261 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 SYT14P1Q58G82 188 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 FAM201AQ5SY85 155 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 PRR5LQ6MZQ0 368 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 MFSD12Q6NUT3 480 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 UNQ9370/PRO34162Q6UXP9 181 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 APOOLQ6UXV4 268 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 ZNF562Q6V9R5 426 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 SRLQ86TD4 932 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 MFN1Q8IWA4 741 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 TDHQ8IZJ6 230 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 PNKDQ8N490 385 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 NOA1Q8NC60 698 aaKnown RBP-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 ZNF439Q8NDP4 499 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 C19orf18Q8NEA5 215 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 DCANP1Q8TF63 244 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 NDRG1Q92597 394 aaKnown RBP-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 ATP6V0A1Q93050 837 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 NSUN4Q96CB9 384 aaKnown RBP-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 HAVCR1Q96D42 359 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 ASB9Q96DX5 294 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 TRIM44Q96DX7 344 aaPredicted RBP-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 HCAR1Q9BXC0 346 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 ABCG5Q9H222 651 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 RABEP2Q9H5N1 569 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 TUBA4BQ9H853 241 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 EDA2RQ9HAV5 297 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 SEPT11Q9NVA2 429 aaKnown RBP-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 SETD4Q9NVD3 440 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 RBM28Q9NW13 759 aaKnown RBP-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 DOK5Q9P104 306 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 VPS54Q9P1Q0 977 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 SLC17A7Q9P2U7 560 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 EIF3KQ9UBQ5 218 aaKnown RBP-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 DBF4Q9UBU7 674 aaPredicted RBP-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 RNF6Q9Y252 685 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 SH3GLB1Q9Y371 365 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 CEP83Q9Y592 693 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 DENND4AQ7Z401 1863 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 TGP01266 2768 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 MED12Q93074 2177 aa-1.93□□□□□ -2.72
SNORA40.16-201ENST00000517238 ALMS1Q8TCU4 4167 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 RNF213Q63HN8 5207 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 TEP1Q99973 2627 aaKnown RBP-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 A0A1B0GVC2 190 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 A0A1W2PPM0 123 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 AQP12BA6NM10 295 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 H0YIG0 161 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 STX16O14662 325 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 BUB1O43683 1085 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 SYNGR2O43760 224 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 GUCY1B2O75343 617 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 SUPT3HO75486 399 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 CNMDO75829 334 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 CPSF4O95639 269 aaKnown RBP-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 KRT18P05783 430 aaKnown RBP-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 STSP08842 583 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 MMP10P09238 476 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 WNT2P09544 360 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 OR56A5P0C7T3 313 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 PTBP1P26599 531 aaKnown RBP eCLIP-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 NF2P35240 595 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 STT3AP46977 705 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 ALDH3A2P51648 485 aa-1.94□□□□□ -2.72
SNORA40.16-201ENST00000517238 GUCY2FP51841 1108 aa-1.94□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms