RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 UBXN8O00124 270 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 TSPAN4O14817 238 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 SCAMP1O15126 338 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 RPS6KA5O75582 802 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 GSRP00390 522 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 CSTBP04080 98 aaKnown RBP-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 SRPRAP08240 638 aaKnown RBP-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 CHTF8P0CG12 524 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 TMEM11P17152 192 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 VDAC1P21796 283 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 UCP1P25874 307 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 SLC11A1P49279 550 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 ZNF140P52738 457 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 STARD6P59095 220 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 ESRRGP62508 458 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 SIRPAP78324 504 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 GFOD2Q3B7J2 385 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 METTL11BQ5VVY1 283 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 PLPP4Q5VZY2 271 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 ITPRIPL1Q6GPH6 555 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 RFPL4BQ6ZWI9 263 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 PRUNE1Q86TP1 453 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 C17orf82Q86X59 251 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 CACUL1Q86Y37 369 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 ARMC8Q8IUR7 673 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 OR10G9Q8NGN4 311 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 OR9A1PQ8NGU1 263 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 FAM110BQ8TC76 370 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 SELENOMQ8WWX9 145 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 SLC35C1Q96A29 364 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 MOAP1Q96BY2 351 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 BIRC7Q96CA5 298 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 PERPQ96FX8 193 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 AK8Q96MA6 479 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 ZNF382Q96SR6 550 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 ZNF559Q9BR84 538 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 MMP27Q9H306 513 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 FBXO8Q9NRD0 319 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 IARS2Q9NSE4 1012 aaKnown RBP-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 RRP7BPQ9NSQ0 103 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 DNAJC11Q9NVH1 559 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 ATP6V1HQ9UI12 483 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 RNF150Q9ULK6 438 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 TMA7Q9Y2S6 64 aaKnown RBP-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 PIEZO1Q92508 2521 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 A0A1W2PPQ1 181 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 LNP1A1A4G5 178 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 SH3PXD2BA1X283 911 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 E5RGE8 158 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 AQP9O43315 295 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 CSO75390 466 aaKnown RBP-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 TPPPO94811 219 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 IGLV2-23P01705 113 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 LYNP07948 512 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 GIPP09681 153 aaPredicted RBP-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 H2AFZP0C0S5 128 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 GOLGA6DP0CG33 693 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 COX7A1P24310 79 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 NF2P35240 595 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 CAMPP49913 170 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 SNTB2Q13425 540 aaKnown RBP-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 GK2Q14410 553 aaPredicted RBP-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 TMEM183BQ1AE95 376 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 ZNF542PQ5EBM4 170 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 DDX59Q5T1V6 619 aaKnown RBP eCLIP-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 TAF3Q5VWG9 929 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 PRR27Q6MZM9 219 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 MOB2Q70IA6 237 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 LCA10Q71F78 164 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 ASCL5Q7RTU5 278 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 RALGPS2Q86X27 583 aaPredicted RBP-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 TMEM183AQ8IXX5 376 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 ZNF679Q8IYX0 411 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 TMEM105Q8N8V8 129 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 APCDD1LQ8NCL9 501 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 OR8H1Q8NGG4 311 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 ASB9Q96DX5 294 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 TMEM121Q9BTD3 319 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 LINC00574Q9H8X3 128 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 Q9HAA7 133 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 SLCO1C1Q9NYB5 712 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 SWAP70Q9UH65 585 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 CHORDC1Q9UHD1 332 aaPredicted RBP-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 CIDEBQ9UHD4 219 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 NSG2Q9Y328 171 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 OR10H1Q9Y4A9 318 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 DYSFO75923 2080 aa-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 GPATCH8Q9UKJ3 1502 aaKnown RBP-1.96□□□□□ -2.72
RNU6-539P-201ENST00000516665 PDS5BQ9NTI5 1447 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 K7ENP7 123 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 TYROBPO43914 113 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 SUPT3HO75486 399 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 SLC16A8O95907 504 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 F9P00740 461 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 PENKP01210 267 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 EPCAMP16422 314 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 PON1P27169 355 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 UBE2AP49459 152 aa-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 KLF3P57682 345 aaPredicted RBP-1.97□□□□□ -2.72
RNU6-539P-201ENST00000516665 TMF1P82094 1093 aa-1.97□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms