RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 PSMC2P35998 433 aaKnown RBP-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 PBX3P40426 434 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 SLC11A1P49279 550 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 FHITP49789 147 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 KLF3P57682 345 aaPredicted RBP-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 TGM3Q08188 693 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 SNTB2Q13425 540 aaKnown RBP-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 NPTX1Q15818 432 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 ZNF660Q6AZW8 331 aaPredicted RBP-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 CYP20A1Q6UW02 462 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 C6orf89Q6UWU4 347 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 ASCL5Q7RTU5 278 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 ANKRD33Q7Z3H0 272 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 PNKDQ8N490 385 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 FBXO39Q8N4B4 442 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 TMEM105Q8N8V8 129 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 RFESDQ8TAC1 157 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 DNAJA4Q8WW22 397 aaPredicted RBP-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 SELENOMQ8WWX9 145 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 OR1E3Q8WZA6 343 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 TTC17Q96AE7 1141 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 SPDL1Q96EA4 605 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 SGCZQ96LD1 299 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 UBXN10Q96LJ8 280 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 AK8Q96MA6 479 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 ABHD1Q96SE0 405 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 C17orf62Q9BQA9 187 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 PLK3Q9H4B4 646 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 LINC00574Q9H8X3 128 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 ZNRD1Q9P1U0 126 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 TRPC4Q9UBN4 977 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 TRMT6Q9UJA5 497 aaKnown RBP-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 OR10H1Q9Y4A9 318 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 HYDINQ4G0P3 5121 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 OTOFQ9HC10 1997 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 CRB1P82279 1406 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 PDS5BQ9NTI5 1447 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 H7C417 338 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 UBXN8O00124 270 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 TYROBPO43914 113 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 SLC16A8O95907 504 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 SCGB1D2O95969 90 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 MMP10P09238 476 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 H2AFZP0C0S5 128 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 VDAC1P21796 283 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 STARP49675 285 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 PRMT2P55345 433 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 STARD6P59095 220 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 EMX1Q04741 257 aaPredicted RBP-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 SIM2Q14190 667 aaPredicted RBP-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 CCNG2Q16589 344 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 TMEM183BQ1AE95 376 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 TAF3Q5VWG9 929 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 PLPP4Q5VZY2 271 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 TMCO3Q6UWJ1 677 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 C17orf107Q6ZR85 190 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 TMPPEQ6ZT21 453 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 RFPL4BQ6ZWI9 263 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 CAMK2N1Q7Z7J9 78 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 TMEM173Q86WV6 379 aaPredicted RBP-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 CEP57Q86XR8 500 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 CACUL1Q86Y37 369 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 TMEM183AQ8IXX5 376 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 FTSJ3Q8IY81 847 aaKnown RBP-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 ZNF679Q8IYX0 411 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 ZNF645Q8N7E2 425 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 APCDD1LQ8NCL9 501 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 APPL2Q8NEU8 664 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 ASB9Q96DX5 294 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 SAAL1Q96ER3 474 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 APOPT1Q96IL0 206 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 ZNF559Q9BR84 538 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 NAA38Q9BRA0 125 aaKnown RBP-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 DUSP16Q9BY84 665 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 MMP27Q9H306 513 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 FBXO8Q9NRD0 319 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 MED17Q9NVC6 651 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 SMPD3Q9NY59 655 aaPredicted RBP-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 SLCO1C1Q9NYB5 712 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 CHORDC1Q9UHD1 332 aaPredicted RBP-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 CIDEBQ9UHD4 219 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 MYCBP2O75592 4640 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 RTTNQ86VV8 2226 aa-1.64□□□□□ -2.67
RNU6-542P-201ENST00000516405 BRWD1Q9NSI6 2320 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 KDM3AQ9Y4C1 1321 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 AHDC1Q5TGY3 1603 aaPredicted RBP-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 TRAV24A0A0B4J272 114 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 A0A1B0GUH1 482 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 A0A1W2PPQ1 181 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 VPS37CA5D8V6 355 aaPredicted RBP-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 SCAMP1O15126 338 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 VEGFDO43915 354 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 CSO75390 466 aaKnown RBP-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 SUPT3HO75486 399 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 GSRP00390 522 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 F9P00740 461 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 HLA-DQA1P01909 254 aa-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 CENPBP07199 599 aaPredicted RBP-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 GIPP09681 153 aaPredicted RBP-1.65□□□□□ -2.67
RNU6-542P-201ENST00000516405 COX7A1P24310 79 aa-1.65□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms