RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 CLDN20P56880 219 aa14.16□□□□□ -0.14
LMNA-223ENST00000515459 RPS3AP61247 264 aaKnown RBP14.16□□□□□ -0.14
LMNA-223ENST00000515459 GNG11P61952 73 aa14.16□□□□□ -0.14
LMNA-223ENST00000515459 OCRLQ01968 901 aa14.16□□□□□ -0.14
LMNA-223ENST00000515459 DMTNQ08495 405 aa14.16□□□□□ -0.14
LMNA-223ENST00000515459 TNK1Q13470 666 aa14.16□□□□□ -0.14
LMNA-223ENST00000515459 CAPRIN1Q14444 709 aaKnown RBP14.16□□□□□ -0.14
LMNA-223ENST00000515459 GUSBP1Q15486 140 aa14.16□□□□□ -0.14
LMNA-223ENST00000515459 SLC44A2Q8IWA5 706 aaPredicted RBP14.16□□□□□ -0.14
LMNA-223ENST00000515459 C1orf52Q8N6N3 182 aaKnown RBP14.16□□□□□ -0.14
LMNA-223ENST00000515459 ZNF611Q8N823 705 aa14.16□□□□□ -0.14
LMNA-223ENST00000515459 OR9A2Q8NGT5 310 aa14.16□□□□□ -0.14
LMNA-223ENST00000515459 KAT2AQ92830 837 aa14.16□□□□□ -0.14
LMNA-223ENST00000515459 GFM2Q969S9 779 aaKnown RBP14.16□□□□□ -0.14
LMNA-223ENST00000515459 MRRFQ96E11 262 aaKnown RBP14.16□□□□□ -0.14
LMNA-223ENST00000515459 NAPGQ99747 312 aaPredicted RBP14.16□□□□□ -0.14
LMNA-223ENST00000515459 PTGES2Q9H7Z7 377 aa14.16□□□□□ -0.14
LMNA-223ENST00000515459 FOLH1BQ9HBA9 442 aa14.16□□□□□ -0.14
LMNA-223ENST00000515459 SDHAF3Q9NRP4 125 aa14.16□□□□□ -0.14
LMNA-223ENST00000515459 MED11Q9P086 117 aa14.16□□□□□ -0.14
LMNA-223ENST00000515459 OR10H1Q9Y4A9 318 aa14.16□□□□□ -0.14
LMNA-223ENST00000515459 ROS1P08922 2347 aa14.16□□□□□ -0.14
LMNA-223ENST00000515459 PCNX3Q9H6A9 2034 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 USF3Q68DE3 2245 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 HS3ST1O14792 307 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 RAD51CO43502 376 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 SOX30O94993 753 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 PLAUP00749 431 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 RBP1P09455 135 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 SERPINB8P50452 374 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 CAV1Q03135 178 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 SGCBQ16585 318 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 HEPHL1Q6MZM0 1159 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 SAMD14Q8IZD0 417 aaPredicted RBP14.15□□□□□ -0.14
LMNA-223ENST00000515459 METTL25Q8N6Q8 603 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 OR4N2Q8NGD1 307 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 OR5M1Q8NGP8 315 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 UHMK1Q8TAS1 419 aaKnown RBP14.15□□□□□ -0.14
LMNA-223ENST00000515459 PLPPR2Q96GM1 343 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 VPS11Q9H270 941 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 PLSCR4Q9NRQ2 329 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 TAS2R9Q9NYW1 312 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 SNX6Q9UNH7 406 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 EMC9Q9Y3B6 208 aa14.15□□□□□ -0.14
LMNA-223ENST00000515459 STAB1Q9NY15 2570 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 OR2M5A3KFT3 312 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 RNF212BA8MTL3 300 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 SMIM24O75264 130 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 AQP8O94778 261 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 OTCP00480 354 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 UAP1Q16222 522 aaPredicted RBP14.14□□□□□ -0.15
LMNA-223ENST00000515459 CLEC12BQ2HXU8 276 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 HMBOX1Q6NT76 420 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 PLD6Q8N2A8 252 aaKnown RBP14.14□□□□□ -0.15
LMNA-223ENST00000515459 OR6K3Q8NGY3 331 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 FBXO25Q8TCJ0 367 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 MTBPQ96DY7 904 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 PRRG4Q9BZD6 226 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 FANCFQ9NPI8 374 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 GIMAP4Q9NUV9 329 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 SENP1Q9P0U3 644 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 VPS29Q9UBQ0 182 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 ABCG2Q9UNQ0 655 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 LAMP3Q9UQV4 416 aa14.14□□□□□ -0.15
LMNA-223ENST00000515459 RNF223E7ERA6 249 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 FADS1O60427 444 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 PLOD3O60568 738 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 PLGP00747 810 aaPredicted RBP14.13□□□□□ -0.15
LMNA-223ENST00000515459 IL3P08700 152 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 CTAGE8P0CG41 777 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 RPS4XP62701 263 aaKnown RBP14.13□□□□□ -0.15
LMNA-223ENST00000515459 PSG6Q00889 435 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 STX5Q13190 355 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 VEZF1Q14119 521 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 ETFDHQ16134 617 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 GLYR1Q49A26 553 aaPredicted RBP14.13□□□□□ -0.15
LMNA-223ENST00000515459 SH2D4BQ5SQS7 431 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 PPP4R4Q6NUP7 873 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 LETMD1Q6P1Q0 360 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 PODNL1Q6PEZ8 512 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 STAC2Q6ZMT1 411 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 RPS27LQ71UM5 84 aaKnown RBP14.13□□□□□ -0.15
LMNA-223ENST00000515459 WFDC8Q8IUA0 241 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 CTAGE4Q8IX94 777 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 MAPK1IP1LQ8NDC0 245 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 EXOSC8Q96B26 276 aaKnown RBP14.13□□□□□ -0.15
LMNA-223ENST00000515459 C1GALT1C1Q96EU7 318 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 HBEGFQ99075 208 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 TMEM204Q9BSN7 226 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 XPR1Q9UBH6 696 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 MCM8Q9UJA3 840 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 UTP11Q9Y3A2 253 aaKnown RBP14.13□□□□□ -0.15
LMNA-223ENST00000515459 AP4B1Q9Y6B7 739 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 SONP18583 2426 aaKnown RBP14.13□□□□□ -0.15
LMNA-223ENST00000515459 MXRA5Q9NR99 2828 aa14.13□□□□□ -0.15
LMNA-223ENST00000515459 PPP6CO00743 305 aa14.12□□□□□ -0.15
LMNA-223ENST00000515459 IFNA2P01563 188 aa14.12□□□□□ -0.15
LMNA-223ENST00000515459 TP53P04637 393 aaPredicted RBP14.12□□□□□ -0.15
LMNA-223ENST00000515459 RPS17P08708 135 aaKnown RBP14.12□□□□□ -0.15
LMNA-223ENST00000515459 IL11P20809 199 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms