RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 NUF2Q9BZD4 464 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 DSN1Q9H410 356 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 SSU72Q9NP77 194 aaKnown RBP10.47□□□□□ -0.73
VCAN-212ENST00000515397 SIRT3Q9NTG7 399 aaPredicted RBP10.47□□□□□ -0.73
VCAN-212ENST00000515397 FBXO34Q9NWN3 711 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 QPCTLQ9NXS2 382 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 MED11Q9P086 117 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 ATP6V1HQ9UI12 483 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 CAMK2AQ9UQM7 478 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 RAP2CQ9Y3L5 183 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 KLF2Q9Y5W3 355 aaPredicted RBP10.47□□□□□ -0.73
VCAN-212ENST00000515397 SNX8Q9Y5X2 465 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 POLQO75417 2590 aa10.47□□□□□ -0.73
VCAN-212ENST00000515397 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 A0A0G2JNJ9 132 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 FIGNL2A6NMB9 653 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 HNRNPRO43390 633 aaKnown RBP10.46□□□□□ -0.73
VCAN-212ENST00000515397 TOXO94900 526 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 ZWINTO95229 277 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 UTS2O95399 124 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 C6orf47O95873 294 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 KITP10721 976 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 ACP2P11117 423 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 GRK2P25098 689 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 MAPK1P28482 360 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 HPCAL1P37235 193 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 RPL14P50914 215 aaKnown RBP10.46□□□□□ -0.73
VCAN-212ENST00000515397 AGFG1P52594 562 aaKnown RBP10.46□□□□□ -0.73
VCAN-212ENST00000515397 PNLIPRP2P54317 469 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 GAS1P54826 345 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 NME5P56597 212 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 CRYZQ08257 329 aaKnown RBP10.46□□□□□ -0.73
VCAN-212ENST00000515397 EFR3AQ14156 821 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 ZNHIT3Q15649 155 aaPredicted RBP10.46□□□□□ -0.73
VCAN-212ENST00000515397 DECR1Q16698 335 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 CYP27C1Q4G0S4 372 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 CCNJQ5T5M9 372 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 CPTPQ5TA50 214 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 VASNQ6EMK4 673 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 APOOLQ6UXV4 268 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 R3HCC1LQ7Z5L2 792 aaKnown RBP10.46□□□□□ -0.73
VCAN-212ENST00000515397 ZAR1Q86SH2 424 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 PLCZ1Q86YW0 608 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 TRIM42Q8IWZ5 723 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 MCEMP1Q8IX19 187 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 EID3Q8N140 333 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 SLC16A11Q8NCK7 471 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 OR14L1PQ8NHC6 308 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 LILRB4Q8NHJ6 448 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 DUSP19Q8WTR2 217 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 JADE3Q92613 823 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 ABTB1Q969K4 478 aaPredicted RBP10.46□□□□□ -0.73
VCAN-212ENST00000515397 ARL8AQ96BM9 186 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 GIMAP5Q96F15 307 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 CHMP6Q96FZ7 201 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 LMF2Q9BU23 707 aaKnown RBP10.46□□□□□ -0.73
VCAN-212ENST00000515397 CXorf36Q9H7Y0 433 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 Q9N2J8 555 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 TAS2R10Q9NYW0 307 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 MARCOQ9UEW3 520 aaPredicted RBP10.46□□□□□ -0.73
VCAN-212ENST00000515397 Q9UFV3 132 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 WIF1Q9Y5W5 379 aa10.46□□□□□ -0.73
VCAN-212ENST00000515397 INTS1Q8N201 2190 aaKnown RBP10.46□□□□□ -0.74
VCAN-212ENST00000515397 LRBAP50851 2863 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 EXPH5Q8NEV8 1989 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 SHISA8B8ZZ34 492 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 C9JVG2 144 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 EMC8O43402 210 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 FADS1O60427 444 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 ZIC3O60481 467 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 TBX19O60806 448 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 ABCB7O75027 752 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 WDR1O75083 606 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 ERLIN1O75477 346 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 CBR3O75828 277 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 COX6B1P14854 86 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 AGAP20933 346 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 CHRNB4P30926 498 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 EVI2BP34910 448 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 FRKP42685 505 aaPredicted RBP10.45□□□□□ -0.74
VCAN-212ENST00000515397 CASP9P55211 416 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 MRPS22P82650 360 aaKnown RBP10.45□□□□□ -0.74
VCAN-212ENST00000515397 EMX2Q04743 252 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 SNTA1Q13424 505 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 LASP1Q14847 261 aaKnown RBP10.45□□□□□ -0.74
VCAN-212ENST00000515397 DUSP5Q16690 384 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 GRAMD1BQ3KR37 738 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 ACAD11Q709F0 780 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 RIMKLAQ8IXN7 391 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 GATSQ8NAP1 163 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 TNIP2Q8NFZ5 429 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 OR4K17Q8NGC6 315 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 OR4C3Q8NH37 302 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 OR5AK3PQ8NH89 298 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 ZFP28Q8NHY6 868 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 FAM120BQ96EK7 910 aaKnown RBP10.45□□□□□ -0.74
VCAN-212ENST00000515397 WDYHV1Q96HA8 205 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 TRIB1Q96RU8 372 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 KLHDC3Q9BQ90 382 aa10.45□□□□□ -0.74
VCAN-212ENST00000515397 C3orf14Q9HBI5 128 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms