RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 CD53P19397 219 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 CPOXP36551 454 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 NCBP2P52298 156 aaKnown RBP eCLIP11.03□□□□□ -0.642e-15■■■■■ 31.3
SNHG4-208ENST00000514110 SUCLG1P53597 346 aaKnown RBP11.03□□□□□ -0.64
SNHG4-208ENST00000514110 DIO3P55073 304 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 TPD52P55327 224 aaPredicted RBP11.03□□□□□ -0.64
SNHG4-208ENST00000514110 CLDN15P56746 228 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 ZNF763Q0D2J5 394 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 BCL2A1Q16548 175 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 FAM71E1Q6IPT2 247 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 TMEM107Q6UX40 140 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 LCA5Q86VQ0 697 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 KRTAP1-3Q8IUG1 177 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 UBQLNLQ8IYU4 475 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 CCNYL1Q8N7R7 359 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 OR2M3Q8NG83 312 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNHG4-208ENST00000514110 MZB1Q8WU39 189 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 SMPDL3BQ92485 455 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 STARD4Q96DR4 205 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 DTNBP1Q96EV8 351 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 STMN4Q9H169 189 aaPredicted RBP11.03□□□□□ -0.64
SNHG4-208ENST00000514110 GLIPR2Q9H4G4 154 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 MID1IP1Q9NPA3 183 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 MED11Q9P086 117 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 C19orf53Q9UNZ5 99 aaPredicted RBP11.03□□□□□ -0.64
SNHG4-208ENST00000514110 TESMINQ9Y4I5 508 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 ABCA4P78363 2273 aa11.03□□□□□ -0.64
SNHG4-208ENST00000514110 CCDC151A5D8V7 595 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 SLC22A20A6NK97 555 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 G3V2L1 256 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 UPK1AO00322 258 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 MSTNO14793 375 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 SIAH2O43255 324 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 COQ9O75208 318 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 SMNDC1O75940 238 aaKnown RBP eCLIP11.02□□□□□ -0.653e-24■■■■□ 21.7
SNHG4-208ENST00000514110 PSMG1O95456 288 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 GSTA1P08263 222 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 FAM153BP0C7A2 387 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 PEPDP12955 493 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 HK1P19367 917 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 HOXC12P31275 282 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 GSTM5P46439 218 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 EEF1A1P68104 462 aaKnown RBP11.02□□□□□ -0.65
SNHG4-208ENST00000514110 MRPS22P82650 360 aaKnown RBP11.02□□□□□ -0.65
SNHG4-208ENST00000514110 FAM27E3Q08E93 113 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 STX5Q13190 355 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 SLC29A2Q14542 456 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 FAM153CQ494X1 144 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 CYP27C1Q4G0S4 372 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 EEF1A1P5Q5VTE0 462 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 RAET1LQ5VY80 246 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 ZNF474Q6S9Z5 364 aaPredicted RBP11.02□□□□□ -0.65
SNHG4-208ENST00000514110 TRMT10CQ7L0Y3 403 aaKnown RBP11.02□□□□□ -0.65
SNHG4-208ENST00000514110 P4HA3Q7Z4N8 544 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 BTLAQ7Z6A9 289 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 OR5M1Q8NGP8 315 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 ACMSDQ8TDX5 336 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 FIG4Q92562 907 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 WFIKKN1Q96NZ8 548 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 SHCBP1LQ9BZQ2 653 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 NEUROD4Q9HD90 331 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 TNFRSF12AQ9NP84 129 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 MIEF1Q9NQG6 463 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 TAS2R7Q9NYW3 318 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 PSMC3IPQ9P2W1 217 aaPredicted RBP11.02□□□□□ -0.65
SNHG4-208ENST00000514110 NDRG3Q9UGV2 375 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 TBK1Q9UHD2 729 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 GRID1Q9ULK0 1009 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 ZNF337Q9Y3M9 751 aa11.02□□□□□ -0.65
SNHG4-208ENST00000514110 POLR3HQ9Y535 204 aaPredicted RBP11.02□□□□□ -0.65
SNHG4-208ENST00000514110 FLNAP21333 2647 aaKnown RBP11.02□□□□□ -0.65
SNHG4-208ENST00000514110 A0A1W2PPM1 405 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 CASKO14936 926 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 CTIFO43310 598 aaKnown RBP11.01□□□□□ -0.65
SNHG4-208ENST00000514110 SLITRK5O94991 958 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 IL33O95760 270 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 CRHP06850 196 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 KIR2DL2P43627 348 aaPredicted RBP11.01□□□□□ -0.65
SNHG4-208ENST00000514110 DECR1Q16698 335 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 ZYG11AQ6WRX3 759 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 CHMP1BQ7LBR1 199 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 TRIM46Q7Z4K8 759 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 MARCH3Q86UD3 253 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 CXorf67Q86X51 503 aaPredicted RBP11.01□□□□□ -0.65
SNHG4-208ENST00000514110 OR2L13Q8N349 312 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 MEIOBQ8N635 442 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 CNEP1R1Q8N9A8 125 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 DUSP19Q8WTR2 217 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 PGM2Q96G03 612 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 AMDHD1Q96NU7 426 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 SMR3AQ99954 134 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 PINK1Q9BXM7 581 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 TXLNGYQ9BZA5 131 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 OPN3Q9H1Y3 402 aaPredicted RBP11.01□□□□□ -0.65
SNHG4-208ENST00000514110 MYNNQ9NPC7 610 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 BEX4Q9NWD9 120 aaPredicted RBP11.01□□□□□ -0.65
SNHG4-208ENST00000514110 C6orf203Q9P0P8 240 aaPredicted RBP11.01□□□□□ -0.65
SNHG4-208ENST00000514110 DCDC2Q9UHG0 476 aa11.01□□□□□ -0.65
SNHG4-208ENST00000514110 ABCG2Q9UNQ0 655 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms