RNA–Protein interactions for RNA: ENST00000514096.5

LIMCH1-219, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-219ENST00000514096 STARP49675 285 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 RPS3AP61247 264 aaKnown RBP7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 RPS13P62277 151 aaKnown RBP7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 TBR1Q16650 682 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 IMPG1Q17R60 797 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 ZNF750Q32MQ0 723 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 CFAP161Q6P656 301 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 SEZ6L2Q6UXD5 910 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 ISCA2Q86U28 154 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 CENPLQ8N0S6 344 aaPredicted RBP7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 EXD3Q8N9H8 876 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 RNASE11Q8TAA1 199 aaKnown RBP7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 SELENOMQ8WWX9 145 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 ISOC1Q96CN7 298 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 TEFMQ96QE5 360 aaKnown RBP7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 RBM4BQ9BQ04 359 aaKnown RBP7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 RBM4Q9BWF3 364 aaKnown RBP7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 IL1RAPQ9NPH3 570 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 TAS2R1Q9NYW7 299 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 GLTPQ9NZD2 209 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 VSX1Q9NZR4 365 aaPredicted RBP7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 FBXL4Q9UKA2 621 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 MGAT4BQ9UQ53 548 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 A6NJY4 79 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 ZNF891A8MT65 544 aaPredicted RBP7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 CDK1P06493 297 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 ZGLP1P0C6A0 271 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 HPCAL1P37235 193 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 ARG2P78540 354 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 TXNL4AP83876 142 aaKnown RBP7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 HERC3Q15034 1050 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 FOXRED2Q8IWF2 684 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 KLHDC8AQ8IYD2 350 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 TAGAPQ8N103 731 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 RNF148Q8N7C7 305 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 LHFPL5Q8TAF8 219 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 SLCO2A1Q92959 643 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 UCN3Q969E3 161 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 TMEM68Q96MH6 324 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 GPR22Q99680 433 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 RAB11FIP5Q9BXF6 653 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 NMRAL1Q9HBL8 299 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 MID1IP1Q9NPA3 183 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 SIDT1Q9NXL6 827 aaKnown RBP7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 COPZ2Q9P299 210 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 CNOT11Q9UKZ1 510 aaKnown RBP7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 MYRFQ9Y2G1 1151 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 DOCK10Q96BY6 2186 aa7.39□□□□□ -1.23
LIMCH1-219ENST00000514096 RTTNQ86VV8 2226 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 NSG1A0A0A6YYJ2 146 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 HMX2A2RU54 273 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 MAGEB17A8MXT2 336 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 TMEM233B4DJY2 109 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 GSTA4O15217 222 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 CHST10O43529 356 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 ATE1O95260 518 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 CD247P20963 164 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 IL12AP29459 219 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 PMP22Q01453 160 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 NKG7Q16617 165 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 FAM91A1Q658Y4 838 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 HIST2H2BCQ6DN03 193 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 RASSF6Q6ZTQ3 369 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 PDSS2Q86YH6 399 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 MMP21Q8N119 569 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 KLHL6Q8WZ60 621 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 RHBDF1Q96CC6 855 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 C19orf60Q96EN9 201 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 DNAJA3Q96EY1 480 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 POLE3Q9NRF9 147 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 ABCG2Q9UNQ0 655 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 HSPB11Q9Y547 144 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 FER1L5A0AVI2 2057 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 OR6C70A6NIJ9 312 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 H7C2Y5 167 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 K7ENP7 123 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 ECHS1P30084 290 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 FEN1P39748 380 aaKnown RBP7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 DGKQP52824 942 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 PRKAG1P54619 331 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 KCNAB2Q13303 367 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 ZNF846Q147U1 533 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 LRRC8EQ6NSJ5 796 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 INO80CQ6PI98 192 aaPredicted RBP7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 WDR53Q7Z5U6 358 aaPredicted RBP7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 BTLAQ7Z6A9 289 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 PRR22Q8IZ63 422 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 DNAJB14Q8TBM8 379 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 TSPEARQ8WU66 669 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 ILKAPQ9H0C8 392 aaPredicted RBP7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 RACGAP1Q9H0H5 632 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 RIMS4Q9H426 269 aaPredicted RBP7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 RDH8Q9NYR8 311 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 KIF17Q9P2E2 1029 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 SLC17A7Q9P2U7 560 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 EPHA6Q9UF33 1036 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 PADI2Q9Y2J8 665 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 B4E171 279 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 E7ESA3 106 aa7.38□□□□□ -1.23
LIMCH1-219ENST00000514096 TAPBPO15533 448 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms