RNA–Protein interactions for RNA: ENST00000513405.1

AP001999.1-201, humanhuman

TSL 2 BASIC

Gene AP001999.1, Length 3,684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.1-201ENST00000513405 PDXPQ96GD0 296 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 NARS2Q96I59 477 aaKnown RBP12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 ZNF582Q96NG8 517 aaPredicted RBP12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 PITX2Q99697 317 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 GABARAPL1Q9H0R8 117 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 NANSQ9NR45 359 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 KCMF1Q9P0J7 381 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 PRUNE2Q8WUY3 3088 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 KNTC1P50748 2209 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 PTPRDP23468 1912 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 LOC105369274A0A096LPK9 316 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 ISPDA4D126 451 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 ZAR1LA6NP61 321 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 I3L521 148 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 ITGB7P26010 798 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 SOX2P48431 317 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 WNT4P56705 351 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 ARPC4P59998 168 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 ZNF267Q14586 743 aaPredicted RBP12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 TRAM2Q15035 370 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 ZNF77Q15935 545 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 LUZP2Q86TE4 346 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 NLRP8Q86W28 1048 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 OR4N4Q8N0Y3 316 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 KLHL36Q8N4N3 616 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 SLC37A3Q8NCC5 494 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 SIPA1Q96FS4 1042 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 OR7D2Q96RA2 312 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 NOX1Q9Y5S8 564 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 OR6C74A6NCV1 312 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 TMEM221A6NGB7 291 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 FOXE1O00358 373 aaPredicted RBP12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 PTTG1O95997 202 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 ATF4P18848 351 aaPredicted RBP12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 HIST1H1TP22492 207 aaPredicted RBP12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 ERVK-21P61565 698 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 E2F2Q14209 437 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 P2RY14Q15391 338 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 OOSP2Q86WS3 158 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 ELMOD2Q8IZ81 293 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 PRSS16Q9NQE7 514 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 SEMA4GQ9NTN9 838 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 SAGE1Q9NXZ1 904 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 MRPL39Q9NYK5 338 aaKnown RBP12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 STMN3Q9NZ72 180 aa12.84□□□□□ -0.35
AP001999.1-201ENST00000513405 TIMP1P01033 207 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 HLA-DQA2P01906 255 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 SRPRAP08240 638 aaKnown RBP12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 TRIM23P36406 574 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 PDX1P52945 283 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 PRDX1Q06830 199 aaKnown RBP12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 STX4Q12846 297 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 ENTPD8Q5MY95 495 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 ZNF793Q6ZN11 406 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 OR5T3Q8NGG3 340 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 OR4K13Q8NH42 304 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 OR4C6Q8NH72 309 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 SETD7Q8WTS6 366 aaKnown RBP12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 SNX33Q8WV41 574 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 NEURL3Q96EH8 262 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 CNRIP1Q96F85 164 aaPredicted RBP12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 FOXN4Q96NZ1 517 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 CHD7Q9P2D1 2997 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 TBX21Q9UL17 535 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 GRIP1Q9Y3R0 1128 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 SPACA6W5XKT8 324 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 ANKRD61A6NGH8 418 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 VEGFDO43915 354 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 RAD1O60671 282 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 CXCL10P02778 98 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 CTSEP14091 401 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 BSGP35613 385 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 SHC2P98077 582 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 EIF4HQ15056 248 aaKnown RBP12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 ESPNLQ6ZVH7 1005 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 VASH1Q7L8A9 365 aaPredicted RBP12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 CXXC5Q7LFL8 322 aaKnown RBP12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 CEACAM19Q7Z692 300 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 LINC01555Q8NAE3 123 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 SPPL3Q8TCT6 385 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 WFIKKN2Q8TEU8 576 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 HERVK_113Q902F9 699 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 ZMYND19Q96E35 227 aaPredicted RBP12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 PTCHD1Q96NR3 888 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 RAD9AQ99638 391 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 SGPP1Q9BX95 441 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 TMEM38AQ9H6F2 299 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 A0A0B4J203 849 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 POM121BA6NF01 834 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 CHURC1-FNTBB4DL54 471 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 VSX2P58304 361 aaPredicted RBP12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 GNA13Q14344 377 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 LILRA6Q6PI73 481 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 OR52E4Q8NGH9 312 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 OR5K2Q8NHB8 316 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 THSD1Q9NS62 852 aa12.83□□□□□ -0.36
AP001999.1-201ENST00000513405 MED12Q93074 2177 aa12.82□□□□□ -0.36
AP001999.1-201ENST00000513405 SH3D21A4FU49 640 aa12.82□□□□□ -0.36
AP001999.1-201ENST00000513405 FAM86C2PA6NEL3 165 aa12.82□□□□□ -0.36
AP001999.1-201ENST00000513405 LRRN3E7EW58 273 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms