RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 SLC9A3R1O14745 358 aaPredicted RBP3.63□□□□□ -1.83
HTT-210ENST00000512909 MAPK13O15264 365 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 KRT86O43790 486 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 ZG16O60844 167 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 SAP30O75446 220 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 KHDRBS3O75525 346 aaKnown RBP3.63□□□□□ -1.83
HTT-210ENST00000512909 NOL4O94818 638 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 CLDN1O95832 211 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 CALCAP01258 141 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 APODP05090 189 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 LYNP07948 512 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 TPM2P07951 284 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 HLA-DPA1P20036 260 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 FCARP24071 287 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 GTF2H1P32780 548 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 OPRL1P41146 370 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 HNF4AP41235 474 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 PPP1R2P41236 205 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 TKTL1P51854 596 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 CRIP2P52943 208 aaPredicted RBP3.63□□□□□ -1.83
HTT-210ENST00000512909 NME5P56597 212 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 KCNK10P57789 538 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 UBE2HP62256 183 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 NOP14P78316 857 aaKnown RBP3.63□□□□□ -1.83
HTT-210ENST00000512909 LRRC63Q05C16 580 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 KDSRQ06136 332 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 KRT81Q14533 505 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 MTF1Q14872 753 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 CFAP221Q4G0U5 840 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 DDI2Q5TDH0 399 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 TMEM270Q6UE05 265 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 SASS6Q6UVJ0 657 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 ASCL5Q7RTU5 278 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 TMEM150AQ86TG1 271 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 UNC93AQ86WB7 457 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 METTL4Q8N3J2 472 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 CARNMT1Q8N4J0 409 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 DCLK2Q8N568 766 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 TMEM99Q8N816 258 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 SPATA18Q8TC71 538 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 ST7LQ8TDW4 575 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 NDRG1Q92597 394 aaKnown RBP3.63□□□□□ -1.83
HTT-210ENST00000512909 SLCO2A1Q92959 643 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 C2orf48Q96LS8 159 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 LITAFQ99732 161 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 OPRPNQ99935 248 aaPredicted RBP3.63□□□□□ -1.83
HTT-210ENST00000512909 ZNF559Q9BR84 538 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 CRACR2AQ9BSW2 395 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 MCRIP2Q9BUT9 160 aaKnown RBP3.63□□□□□ -1.83
HTT-210ENST00000512909 DUSP16Q9BY84 665 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 SLC39A8Q9C0K1 460 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 ZNF350Q9GZX5 532 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 FBXO44Q9H4M3 255 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 ECT2Q9H8V3 914 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 CYP3A43Q9HB55 503 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 GPN1Q9HCN4 374 aaPredicted RBP3.63□□□□□ -1.83
HTT-210ENST00000512909 DMAP1Q9NPF5 467 aaPredicted RBP3.63□□□□□ -1.83
HTT-210ENST00000512909 CISHQ9NSE2 258 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 ERVK-19Q9WJR5 959 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 BRCA2P51587 3418 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 KIAA1671Q9BY89 1806 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 SYNJ2BP-COX16A0A087WUM0 186 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 TRIM64A6NGJ6 449 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 TRIM64BA6NI03 449 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 NEDD8-MDP1E9PL57 170 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 TRDMT1O14717 391 aaKnown RBP3.62□□□□□ -1.83
HTT-210ENST00000512909 TFECO14948 347 aaPredicted RBP3.62□□□□□ -1.83
HTT-210ENST00000512909 INPP4BO15327 924 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 COCHO43405 550 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 FMO6PO60774 539 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 KLF8O95600 359 aaPredicted RBP3.62□□□□□ -1.83
HTT-210ENST00000512909 GNA14O95837 355 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 PNPP00491 289 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 ASS1P00966 412 aaKnown RBP3.62□□□□□ -1.83
HTT-210ENST00000512909 CFC1BP0CG36 223 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 CFC1P0CG37 223 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 VDRP11473 427 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 KRT3P12035 628 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 C4BPBP20851 252 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 PDHA2P29803 388 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 GPR183P32249 361 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 MAGEA9P43362 315 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 YWHAGP61981 247 aaKnown RBP eCLIP3.62□□□□□ -1.83
HTT-210ENST00000512909 FCHO2Q0JRZ9 810 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 SRSF5Q13243 272 aaKnown RBP3.62□□□□□ -1.83
HTT-210ENST00000512909 CUL2Q13617 745 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 CEACAM7Q14002 265 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 FAM189A2Q15884 450 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 GOLGA7BQ2TAP0 167 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 C1orf220Q5T0J3 134 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 LYPLAL1Q5VWZ2 237 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 ETFRF1Q6IPR1 90 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 C17orf107Q6ZR85 190 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 Q6ZS52 159 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 IL17RELQ6ZVW7 336 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 PAQR9Q6ZVX9 377 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 ARHGAP18Q8N392 663 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 SPEM1Q8N4L4 309 aa3.62□□□□□ -1.83
HTT-210ENST00000512909 DEFB119Q8N690 84 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms