RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CAPN14A8MX76 684 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 HMGB1P1B2RPK0 211 aaPredicted RBP8.13□□□□□ -1.11
NUP54-211ENST00000512151 VWC2LB2RUY7 222 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 SHISA9B4DS77 424 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 FAM157AC9JC47 383 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 CBR3O75828 277 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 GUCA1CO95843 209 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 TGFAP01135 160 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 SBK3P0C264 359 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 ALOX15P16050 662 aaPredicted RBP8.13□□□□□ -1.11
NUP54-211ENST00000512151 KRT15P19012 456 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 ZNF10P21506 573 aaPredicted RBP8.13□□□□□ -1.11
NUP54-211ENST00000512151 ATP5A1P25705 553 aaKnown RBP8.13□□□□□ -1.11
NUP54-211ENST00000512151 CRABP2P29373 138 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 SLC6A8P48029 635 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 IL2P60568 153 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 SLC18A2Q05940 514 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 DOC2AQ14183 400 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 RCN2Q14257 317 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 GGTLC2Q14390 218 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 SLBPQ14493 270 aaKnown RBP eCLIP8.13□□□□□ -1.11
NUP54-211ENST00000512151 OR4D1Q15615 310 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 SPRED3Q2MJR0 410 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 SLCO4C1Q6ZQN7 724 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 FAM214BQ7L5A3 538 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 C4orf33Q8N1A6 199 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 TMEM151AQ8N4L1 468 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 NKAPQ8N5F7 415 aaKnown RBP8.13□□□□□ -1.11
NUP54-211ENST00000512151 RHBDF1Q96CC6 855 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 RBM18Q96H35 190 aaKnown RBP8.13□□□□□ -1.11
NUP54-211ENST00000512151 ATP6V1G3Q96LB4 118 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 ADAD1Q96M93 576 aaKnown RBP8.13□□□□□ -1.11
NUP54-211ENST00000512151 TACO1Q9BSH4 297 aaKnown RBP8.13□□□□□ -1.11
NUP54-211ENST00000512151 PINK1Q9BXM7 581 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 COPS7BQ9H9Q2 264 aaPredicted RBP8.13□□□□□ -1.11
NUP54-211ENST00000512151 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.13□□□□□ -1.11
NUP54-211ENST00000512151 CISD1Q9NZ45 108 aaKnown RBP8.13□□□□□ -1.11
NUP54-211ENST00000512151 TMEM216Q9P0N5 145 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 PTBP2Q9UKA9 531 aaKnown RBP8.13□□□□□ -1.11
NUP54-211ENST00000512151 PRDM4Q9UKN5 801 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 PCDHGB1Q9Y5G3 927 aa8.13□□□□□ -1.11
NUP54-211ENST00000512151 NPEPPSL1A6NEC2 478 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 OR6C76A6NM76 312 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 RGS16O15492 202 aaPredicted RBP8.12□□□□□ -1.11
NUP54-211ENST00000512151 DYRK3O43781 588 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 PRAMEF4O60810 478 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 SPAG7O75391 227 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 TNFRSF21O75509 655 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 CLEC3AO75596 197 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 RGS9O75916 674 aaPredicted RBP8.12□□□□□ -1.11
NUP54-211ENST00000512151 KLHL2O95198 593 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 AIFM1O95831 613 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 LTA4HP09960 611 aaKnown RBP8.12□□□□□ -1.11
NUP54-211ENST00000512151 HIST1H2AGP0C0S8 130 aaPredicted RBP8.12□□□□□ -1.11
NUP54-211ENST00000512151 C1GALT1C1LP0DN25 315 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 KRT4P19013 534 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 HIST1H2ADP20671 130 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 CPN2P22792 545 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 ABCD3P28288 659 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 SRD5A2P31213 254 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 RPS13P62277 151 aaKnown RBP8.12□□□□□ -1.11
NUP54-211ENST00000512151 PLIN5Q00G26 463 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 FGFBP1Q14512 234 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 PON3Q15166 354 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 TSNQ15631 228 aaKnown RBP8.12□□□□□ -1.11
NUP54-211ENST00000512151 TAB1Q15750 504 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 BCL2A1Q16548 175 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 C18orf21Q32NC0 220 aaPredicted RBP8.12□□□□□ -1.11
NUP54-211ENST00000512151 AGBL2Q5U5Z8 902 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 PRAMEF9Q5VWM5 478 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 C18orf63Q68DL7 685 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 SLC30A6Q6NXT4 461 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 AAGABQ6PD74 315 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 TMIGD1Q6UXZ0 262 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 CHMP1BQ7LBR1 199 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 ISCA2Q86U28 154 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 MYO1HQ8N1T3 1032 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 ACOT4Q8N9L9 421 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 ACMSDQ8TDX5 336 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 KAT2AQ92830 837 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 C3orf49Q96BT1 292 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 TLCD1Q96CP7 247 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 HIST1H2AHQ96KK5 128 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 HIST1H2AJQ99878 128 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 H2AFJQ9BTM1 129 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 SORBS1Q9BX66 1292 aaKnown RBP8.12□□□□□ -1.11
NUP54-211ENST00000512151 DERL2Q9GZP9 239 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 CENPHQ9H3R5 247 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 EMCNQ9ULC0 261 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 ZNF490Q9ULM2 529 aaPredicted RBP8.12□□□□□ -1.11
NUP54-211ENST00000512151 GPR52Q9Y2T5 361 aa8.12□□□□□ -1.11
NUP54-211ENST00000512151 GOLGA6L10A6NI86 522 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 DLX3O60479 287 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 PPM1BO75688 479 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 CT62P0C5K7 136 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 MYZAPP0CAP1 466 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 COL6A2P12110 1019 aa8.11□□□□□ -1.11
NUP54-211ENST00000512151 APEHP13798 732 aaKnown RBP8.11□□□□□ -1.11
NUP54-211ENST00000512151 PSMB1P20618 241 aaKnown RBP8.11□□□□□ -1.11
NUP54-211ENST00000512151 SRP14P37108 136 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms