RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ILF2Q12905 390 aaKnown RBP10.34□□□□□ -0.75
RNF4-216ENST00000511859 DDX39BQ13838 428 aaKnown RBP10.34□□□□□ -0.75
RNF4-216ENST00000511859 EFR3AQ14156 821 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 GANABQ14697 944 aaKnown RBP10.34□□□□□ -0.75
RNF4-216ENST00000511859 ERCC6LQ2NKX8 1250 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 CTU2Q2VPK5 515 aaKnown RBP10.34□□□□□ -0.75
RNF4-216ENST00000511859 FAM120AOSQ5T036 256 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 RAET1LQ5VY80 246 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 ALKBH2Q6NS38 261 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 MEX3DQ86XN8 651 aaKnown RBP10.34□□□□□ -0.75
RNF4-216ENST00000511859 IFT20Q8IY31 132 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 PDIK1LQ8N165 341 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 OR4K17Q8NGC6 315 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 NEUROG1Q92886 237 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 TMBIM1Q969X1 311 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 MTERF1Q99551 399 aaKnown RBP10.34□□□□□ -0.75
RNF4-216ENST00000511859 USB1Q9BQ65 265 aaKnown RBP10.34□□□□□ -0.75
RNF4-216ENST00000511859 TRIM2Q9C040 744 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 ANKZF1Q9H8Y5 726 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 SAYSD1Q9NPB0 183 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 ZDHHC18Q9NUE0 388 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 ZNF639Q9UID6 485 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 KCNS2Q9ULS6 477 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 GPR55Q9Y2T6 319 aaPredicted RBP10.34□□□□□ -0.75
RNF4-216ENST00000511859 PCDHGA11Q9Y5H2 935 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 AP4B1Q9Y6B7 739 aa10.34□□□□□ -0.75
RNF4-216ENST00000511859 SS18L1O75177 396 aaPredicted RBP10.33□□□□□ -0.76
RNF4-216ENST00000511859 S100BP04271 92 aaPredicted RBP10.33□□□□□ -0.76
RNF4-216ENST00000511859 ATP1B1P05026 303 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 HK1P19367 917 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 IGFBP5P24593 272 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 KRT20P35900 424 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 GZMKP49863 264 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 PNLIPRP2P54317 469 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 GAS1P54826 345 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 SLC12A2P55011 1212 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 CLDN20P56880 219 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 ATP6V0D1P61421 351 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 PSPHP78330 225 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 LSM11P83369 360 aaKnown RBP eCLIP10.33□□□□□ -0.76
RNF4-216ENST00000511859 CAV1Q03135 178 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 MGAT2Q10469 447 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 GLYR1Q49A26 553 aaPredicted RBP10.33□□□□□ -0.76
RNF4-216ENST00000511859 AGAP6Q5VW22 663 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 FAM166AQ6J272 317 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 TRMT10BQ6PF06 316 aaKnown RBP10.33□□□□□ -0.76
RNF4-216ENST00000511859 NUDT13Q86X67 352 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 ZBED8Q8IZ13 594 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 RNF175Q8N4F7 328 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 RFLNBQ8N5W9 214 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 FADS6Q8N9I5 356 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 FBXO36Q8NEA4 188 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 SGMS2Q8NHU3 365 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 RNF138Q8WVD3 245 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 S100PBPQ96BU1 408 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 ADOQ96SZ5 270 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 BRINP2Q9C0B6 783 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 ADAM19Q9H013 955 aa10.33□□□□□ -0.76
RNF4-216ENST00000511859 PAQR5Q9NXK6 330 aaPredicted RBP10.33□□□□□ -0.76
RNF4-216ENST00000511859 GOLGA6L10A6NI86 522 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 B4DXG7 233 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 H3BML4 177 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 K7EPI3 171 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 TCF21O43680 179 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 TSPAN2O60636 221 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 BCAS2O75934 225 aaPredicted RBP10.32□□□□□ -0.76
RNF4-216ENST00000511859 USF1P22415 310 aaPredicted RBP10.32□□□□□ -0.76
RNF4-216ENST00000511859 ECHS1P30084 290 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 MRPS22P82650 360 aaKnown RBP10.32□□□□□ -0.76
RNF4-216ENST00000511859 ZNF844Q08AG5 666 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 FRG1Q14331 258 aaKnown RBP10.32□□□□□ -0.76
RNF4-216ENST00000511859 RAB35Q15286 201 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 LIPJQ5W064 366 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 GTF2IRD2BQ6EKJ0 949 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 FAM111BQ6SJ93 734 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 GTF2IRD2Q86UP8 949 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 SPATA6LQ8N4H0 392 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 PIWIL2Q8TC59 973 aaKnown RBP10.32□□□□□ -0.76
RNF4-216ENST00000511859 FAM168AQ92567 244 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 ZMYND19Q96E35 227 aaPredicted RBP10.32□□□□□ -0.76
RNF4-216ENST00000511859 FMO2Q99518 471 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 DSN1Q9H410 356 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 PTGES2Q9H7Z7 377 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 PLAC1Q9HBJ0 212 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 SDHAF3Q9NRP4 125 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 MAT2BQ9NZL9 334 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 PPP4R1LQ9P1A2 415 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 PLLPQ9Y342 182 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 PSAT1Q9Y617 370 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 TEX264Q9Y6I9 313 aa10.32□□□□□ -0.76
RNF4-216ENST00000511859 OR2M5A3KFT3 312 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 E7ESA3 106 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 H0YIV9 168 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 WISP3O95389 354 aaPredicted RBP10.31□□□□□ -0.76
RNF4-216ENST00000511859 CBX7O95931 251 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 FAM153BP0C7A2 387 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 CCDC166P0CW27 439 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 CD1DP15813 335 aa10.31□□□□□ -0.76
RNF4-216ENST00000511859 ZNF16P17020 682 aaPredicted RBP10.31□□□□□ -0.76
RNF4-216ENST00000511859 IL12BP29460 328 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms