RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-208ENST00000511175 ARMC12Q5T9G4 340 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 ZSCAN25Q6NSZ9 544 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 STEAP1BQ6NZ63 245 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 ZNF343Q6P1L6 599 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 Q6ZPB1 254 aaPredicted RBP2.36□□□□□ -2.03
SUB1-208ENST00000511175 TRPM8Q7Z2W7 1104 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 DPY19L4Q7Z388 723 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 NET1Q7Z628 596 aaPredicted RBP2.36□□□□□ -2.03
SUB1-208ENST00000511175 BIVMQ86UB2 503 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 RANBP3LQ86VV4 465 aaPredicted RBP2.36□□□□□ -2.03
SUB1-208ENST00000511175 OR4N5Q8IXE1 308 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 SLC22A15Q8IZD6 547 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 LINC00518Q8N0U6 118 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 SYT14Q8NB59 555 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 RELL2Q8NC24 303 aaPredicted RBP2.36□□□□□ -2.03
SUB1-208ENST00000511175 OR9K2Q8NGE7 335 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 OR5M9Q8NGP3 310 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 SLC2A14Q8TDB8 520 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 GATAD1Q8WUU5 269 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 MRPL24Q96A35 216 aaKnown RBP2.36□□□□□ -2.03
SUB1-208ENST00000511175 OMA1Q96E52 524 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 FAM218AQ96MZ4 157 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 PAPOLGQ9BWT3 736 aaKnown RBP2.36□□□□□ -2.03
SUB1-208ENST00000511175 TDRD1Q9BXT4 1180 aaKnown RBP2.36□□□□□ -2.03
SUB1-208ENST00000511175 GSDMCQ9BYG8 508 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 FGFBP2Q9BYJ0 223 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 TRIM9Q9C026 710 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 FAM49AQ9H0Q0 323 aaPredicted RBP2.36□□□□□ -2.03
SUB1-208ENST00000511175 DHX33Q9H6R0 707 aaKnown RBP2.36□□□□□ -2.03
SUB1-208ENST00000511175 ALG9Q9H6U8 611 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 EXO5Q9H790 373 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 ATP13A3Q9H7F0 1226 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 YY1AP1Q9H869 796 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 GPN2Q9H9Y4 310 aaPredicted RBP2.36□□□□□ -2.03
SUB1-208ENST00000511175 IL1RL2Q9HB29 575 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 SLC25A19Q9HC21 320 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 ZFP14Q9HCL3 533 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 FAM114A2Q9NRY5 505 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 ECHDC1Q9NTX5 307 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 UFSP2Q9NUQ7 469 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 INTS9Q9NV88 658 aaKnown RBP2.36□□□□□ -2.03
SUB1-208ENST00000511175 MED17Q9NVC6 651 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 HOXC10Q9NYD6 342 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 GPR83Q9NYM4 423 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 TUBGCP4Q9UGJ1 667 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 IKZF3Q9UKT9 509 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 FZR1Q9UM11 496 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 RNF123Q5XPI4 1314 aa2.36□□□□□ -2.03
SUB1-208ENST00000511175 ATRXP46100 2492 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 SYNJ2O15056 1496 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 IGLV7-46A0A075B6I9 117 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 hCG_38984A0A1B0GV85 526 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 LOC390937A0A1W2PQ73 354 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 TTC26A0AVF1 554 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 ARHGEF35A5YM69 484 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 NCF1BA6NI72 391 aaPredicted RBP2.35□□□□□ -2.03
SUB1-208ENST00000511175 NCF1CA8MVU1 366 aaPredicted RBP2.35□□□□□ -2.03
SUB1-208ENST00000511175 H3BMH7 237 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 SLC1A7O00341 560 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 FOXE1O00358 373 aaPredicted RBP2.35□□□□□ -2.03
SUB1-208ENST00000511175 SIGLEC5O15389 551 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 NBR2O15453 112 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 LRRTM2O43300 516 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 B4GAT1O43505 415 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 KHDRBS3O75525 346 aaKnown RBP2.35□□□□□ -2.03
SUB1-208ENST00000511175 ANXA9O76027 345 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 B3GAT3O94766 335 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 NXPH2O95156 264 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 ANP32DO95626 131 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 NDUFB10O96000 172 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 AGTP01019 485 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 CALCAP01258 141 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 PNMTP11086 282 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 SLC2A2P11168 524 aaPredicted RBP2.35□□□□□ -2.03
SUB1-208ENST00000511175 MBL2P11226 248 aaPredicted RBP2.35□□□□□ -2.03
SUB1-208ENST00000511175 ANXA8P13928 327 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 CCDC130P13994 396 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 MYOGP15173 224 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 RPL35AP18077 110 aaKnown RBP2.35□□□□□ -2.03
SUB1-208ENST00000511175 C4BPBP20851 252 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 LAP3P28838 519 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 CASQ1P31415 396 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 RFC2P35250 354 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 CAPGP40121 348 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 SOX3P41225 446 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 HTR5AP47898 357 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 ZFP36L2P47974 494 aaKnown RBP2.35□□□□□ -2.03
SUB1-208ENST00000511175 FNTAP49354 379 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 PLA2G16P53816 162 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 RPS8P62241 208 aaKnown RBP2.35□□□□□ -2.03
SUB1-208ENST00000511175 SNRPD1P62314 119 aaKnown RBP2.35□□□□□ -2.03
SUB1-208ENST00000511175 CSNK2BP67870 215 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 SRYQ05066 204 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 NCBP1Q09161 790 aaKnown RBP2.35□□□□□ -2.03
SUB1-208ENST00000511175 HNRNPDQ14103 355 aaKnown RBP2.35□□□□□ -2.03
SUB1-208ENST00000511175 EFTUD2Q15029 972 aaKnown RBP eCLIP2.35□□□□□ -2.03
SUB1-208ENST00000511175 RCN1Q15293 331 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 PPP1R7Q15435 360 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 ANXA8L1Q5VT79 327 aa2.35□□□□□ -2.03
SUB1-208ENST00000511175 TMEM225Q6GV28 225 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms