RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 ZSCAN12O43309 604 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 LATO43561 262 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 OR1F1O43749 312 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 TIMM8AO60220 97 aaPredicted RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 KIAA0513O60268 411 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 WDR1O75083 606 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 DNAJB6O75190 326 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 TM7SF2O76062 418 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 STK17BO94768 372 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 SORBS2O94875 1100 aaKnown RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 CLDN9O95484 217 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 FGFR1OPO95684 399 aaKnown RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 FTH1P02794 183 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 H2BFMP0C1H6 154 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 PABPC4LP0CB38 370 aaKnown RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 OR8G3PP0DMU2 310 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 POU2F1P14859 743 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 MYOD1P15172 320 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 TSPAN8P19075 237 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 CPN2P22792 545 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 LHCGRP22888 699 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 PAX7P23759 505 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 U2AF2P26368 475 aaKnown RBP eCLIP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 RRM2P31350 389 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 HSD17B2P37059 387 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 MAGEA8P43361 318 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 NDST1P52848 882 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 LIMK2P53671 638 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 AP3M2P53677 418 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 PLA2G16P53816 162 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 SEC61GP60059 68 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 TPM4P67936 248 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 OGDHQ02218 1023 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 CNTN2Q02246 1040 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 ACY1Q03154 408 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 MFGE8Q08431 387 aaPredicted RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 DMPKQ09013 629 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 BST1Q10588 318 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 CNTN1Q12860 1018 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 GAGE5Q13069 117 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 GAGE6Q13070 117 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 HERC3Q15034 1050 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 ANGPT1Q15389 498 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 CHRNA6Q15825 494 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 SYPL1Q16563 259 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 CAMK4Q16566 473 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 CLPPQ16740 277 aaPredicted RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 MTHFSDQ2M296 383 aaKnown RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 SNAI3Q3KNW1 292 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 RFTN2Q52LD8 501 aaPredicted RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 C6orf226Q5I0X4 101 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 PLPP4Q5VZY2 271 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 SLC35E4Q6ICL7 350 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 OR7E24Q6IFN5 339 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 CAPN13Q6MZZ7 669 aaPredicted RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 FAM71F2Q6NXP2 309 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 DHRS11Q6UWP2 260 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 CEACAM20Q6UY09 585 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 C17orf107Q6ZR85 190 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 NET1Q7Z628 596 aaPredicted RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 LINC00523Q86TU6 105 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 ACOT1Q86TX2 421 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 TMEM17Q86X19 198 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 APLFQ8IW19 511 aaPredicted RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 GPC2Q8N158 579 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 LYG1Q8N1E2 194 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 TCAIMQ8N3R3 496 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 OR7A2PQ8NGA2 310 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 OR11H4Q8NGC9 324 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 OR1J1Q8NGS3 322 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 FGFBP3Q8TAT2 258 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 GLYATL2Q8WU03 294 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 HSD17B8Q92506 261 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 PIK3R3Q92569 461 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 OSTF1Q92882 214 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 SLC25A36Q96CQ1 311 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 SDSLQ96GA7 329 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 SENP5Q96HI0 755 aaPredicted RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 RBM41Q96IZ5 413 aaKnown RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 LRR1Q96L50 414 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 ZNF578Q96N58 590 aaPredicted RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 AMDHD1Q96NU7 426 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 TGS1Q96RS0 853 aaKnown RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 RIT2Q99578 217 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 CITED1Q99966 193 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 SPATA16Q9BXB7 569 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 NLNQ9BYT8 704 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 ROPN1BQ9BZX4 212 aaPredicted RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 CPVLQ9H3G5 476 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 AZI2Q9H6S1 392 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 ZNF665Q9H7R5 613 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 SYNDIG1Q9H7V2 258 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 APOBEC3GQ9HC16 384 aaKnown RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 ZNF160Q9HCG1 818 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 RAVER2Q9HCJ3 691 aaKnown RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 C20orf96Q9NUD7 363 aaPredicted RBP2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 NLGN3Q9NZ94 848 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 PTTG2Q9NZH5 202 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 KLHL9Q9P2J3 617 aa2.09□□□□□ -2.07
DEPDC1B-204ENST00000509006 GALPQ9UBC7 116 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms