RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 PRM3Q9NNZ6 103 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 ISYNA1Q9NPH2 558 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 ZDHHC2Q9UIJ5 367 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 AKT3Q9Y243 479 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 A0A087WUJ7 227 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 LOC102723532A0A0G2JNH3 316 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 FAM171A2A8MVW0 826 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 SLC28A2O43868 658 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 OR2A4O95047 310 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 SLC25A27O95847 323 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 IGF2P01344 180 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 CPN1P15169 458 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 LPOP22079 712 aaPredicted RBP10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 YWHAQP27348 245 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 SLC12A3P55017 1021 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 CASP7P55210 303 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 EMX2Q04743 252 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 PIGHQ14442 188 aaPredicted RBP10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 SLC10A1Q14973 349 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 EOGTQ5NDL2 527 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 BCL2L15Q5TBC7 163 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 LIPKQ5VXJ0 399 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 TDRD10Q5VZ19 366 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 NSUN5P2Q63ZY6 315 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 MFSD7Q6UXD7 560 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 ABHD13Q7L211 337 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 SSX6Q7RTT6 188 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 TMCO2Q7Z6W1 182 aaPredicted RBP10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 GLCCI1Q86VQ1 547 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 DENND1CQ8IV53 801 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 RTL3Q8N8U3 475 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 AQP11Q8NBQ7 271 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 ATP6V1C2Q8NEY4 427 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 BEST4Q8NFU0 473 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 OR9Q2Q8NGE9 314 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 OR13D1Q8NGV5 346 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 CENPIQ92674 756 aaPredicted RBP10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 GPKOWQ92917 476 aaPredicted RBP eCLIP10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 SPACA9Q96E40 222 aaPredicted RBP10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 NUDT11Q96G61 164 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 OR2A7Q96R45 310 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 GAL3ST4Q96RP7 486 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 UBL7Q96S82 380 aaPredicted RBP10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 CNN2Q99439 309 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 SNHG12Q9BXW3 62 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 TM6SF2Q9BZW4 377 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 DPAGT1Q9H3H5 408 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 RNF167Q9H6Y7 350 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 FBRSL1Q9HCM7 1045 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 PDLIM7Q9NR12 457 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 DMAC2Q9NW81 257 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 CCDC167Q9P0B6 97 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 OR52A1Q9UKL2 312 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 CHST2Q9Y4C5 530 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 USP3Q9Y6I4 520 aa10.19□□□□□ -0.78
PDLIM5-210ENST00000508216 A0A1W2PQL4 384 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 UBA6A0AVT1 1052 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 HYKKA2RU49 373 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 IFITM10A6NMD0 228 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 PRR23D1E9PI22 279 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 SPINT1O43278 529 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 SUSD5O60279 629 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 GLP2RO95838 553 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 CST3P01034 146 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 PRR23D2P0DMB1 279 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 GPX3P22352 226 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 MPZP25189 248 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 NDUFV1P49821 464 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 CDKN1CP49918 316 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 CSRP3P50461 194 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 CDH11P55287 796 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 ITGA1P56199 1179 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 MRPS10P82664 201 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 INSM1Q01101 510 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 ZP2Q05996 745 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 LEMD1Q68G75 181 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 CXorf57Q6NSI4 855 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 GPAT2Q6NUI2 795 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 PRSS55Q6UWB4 352 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 LRRN1Q6UXK5 716 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 GDPD4Q6W3E5 623 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 LANCL3Q6ZV70 420 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 GPR149Q86SP6 731 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 MYPOPQ86VE0 399 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 ZNF573Q86YE8 665 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 SLITRK4Q8IW52 837 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 PNLDC1Q8NA58 520 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 EXT2Q93063 718 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 FUZQ9BT04 418 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 SLC6A13Q9NSD5 602 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 RCC2Q9P258 522 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 TRPC4Q9UBN4 977 aa10.18□□□□□ -0.78
PDLIM5-210ENST00000508216 LTN1O94822 1766 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 DOCK1Q14185 1865 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 J3QW42 95 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 CLIC1O00299 241 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 SCAMP2O15127 329 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 SIX6O95475 246 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 EPHA1P21709 976 aa10.17□□□□□ -0.78
PDLIM5-210ENST00000508216 KDELR1P24390 212 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms