RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 CDKL4Q5MAI5 379 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 OR2A2Q6IF42 318 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 GRHL2Q6ISB3 625 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 SLC24A5Q71RS6 500 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 PID1Q7Z2X4 250 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 ACOT1Q86TX2 421 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 HAPLN4Q86UW8 402 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 MARCH9Q86YJ5 346 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 SELENOHQ8IZQ5 122 aaKnown RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 MARVELD2Q8N4S9 558 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 PARP16Q8N5Y8 322 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 TEX26Q8N6G2 289 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 LINC01465Q8N7H1 131 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 KBTBD3Q8NAB2 608 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 INO80EQ8NBZ0 244 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 RNF149Q8NC42 400 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 NOA1Q8NC60 698 aaKnown RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 GJC3Q8NFK1 279 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 STXBP6Q8NFX7 210 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 OR10H4Q8NGA5 316 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 OR4D6Q8NGJ1 314 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 VANGL1Q8TAA9 524 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 MARCH1Q8TCQ1 289 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 STMN2Q93045 179 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 P2RX5Q93086 422 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 GLYATL1Q969I3 302 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 CPNE4Q96A23 557 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 TMEM143Q96AN5 459 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 RAD51AP1Q96B01 352 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 CCDC127Q96BQ5 260 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 PYCR2Q96C36 320 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 CTHRC1Q96CG8 243 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 RAB39BQ96DA2 213 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 SH3YL1Q96HL8 342 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 CELF6Q96J87 481 aaKnown RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 SERAC1Q96JX3 654 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 SGK494Q96LW2 274 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 GPR137Q96N19 417 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 ZNF582Q96NG8 517 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 NDNQ99608 321 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 LMF2Q9BU23 707 aaKnown RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 TM6SF1Q9BZW5 370 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 LYRM4Q9HD34 91 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 MKKSQ9NPJ1 570 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 NANSQ9NR45 359 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 C19orf12Q9NSK7 152 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 TREX1Q9NSU2 369 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 ABHD10Q9NUJ1 306 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 ZNF701Q9NV72 531 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 TAS2R7Q9NYW3 318 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 NLGN3Q9NZ94 848 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 ABCD2Q9UBJ2 740 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 ZNF282Q9UDV7 671 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 PISDQ9UG56 409 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 ZNF229Q9UJW7 825 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 NOCTQ9UK39 431 aaKnown RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 RNF150Q9ULK6 438 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 KIF21BO75037 1637 aa3.3□□□□□ -1.88
HMGB3P15-201ENST00000507326 SYNJ1O43426 1573 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 NEURL4Q96JN8 1562 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 MROH7-TTC4A0A0A0MT08 1334 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 UBN2Q6ZU65 1347 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 USP42Q9H9J4 1324 aaKnown RBP3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 TRAV18A0A075B6X5 111 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 A0A1W2PNV4 684 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 A0A1W2PRD5 423 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 CLEC18AA5D8T8 446 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 TMEM202A6NGA9 273 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 SHISA7A6NL88 538 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 F8VVB4 439 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 F8VWA3 439 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 RNASEK-C17orf49H0YIS7 233 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 H0YJX3 145 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 M0R036 132 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 VCYO14598 125 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 KLF11O14901 512 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 CHUKO15111 745 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 SCAMP2O15127 329 aaKnown RBP3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 RNMTO43148 476 aaKnown RBP3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 ZSCAN12O43309 604 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 B4GAT1O43505 415 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 SPRY2O43597 315 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 OR1F1O43749 312 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 CNTN5O94779 1100 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 DEXIO95424 95 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 ETHE1O95571 254 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 IFNA6P05013 189 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 GIMD1P0DJR0 217 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 MYL2P10916 166 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 TPSB2P20231 275 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 MSH3P20585 1137 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 UGT1A4P22310 534 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 UQCRC2P22695 453 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 FCARP24071 287 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 STOMP27105 288 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 UGT1A5P35504 534 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 UGT2B10P36537 528 aa3.29□□□□□ -1.88
HMGB3P15-201ENST00000507326 CDKN1AP38936 164 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms