RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 OR2M3Q8NG83 312 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 DSN1Q9H410 356 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 GSX1Q9H4S2 264 aaPredicted RBP10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 MIEF1Q9NQG6 463 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 SIRT5Q9NXA8 310 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 EMCNQ9ULC0 261 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 TESMINQ9Y4I5 508 aa10.44□□□□□ -0.74
HMGCS1-204ENST00000507293 A0A087WV62 115 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 SERTM1A2A2V5 107 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 SLC22A20A6NK97 555 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 A8MXE2 369 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 UBFD1O14562 309 aaKnown RBP10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 SMNDC1O75940 238 aaKnown RBP eCLIP10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 GSTA1P08263 222 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 PEPDP12955 493 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 HOXB4P17483 251 aaPredicted RBP10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 HK1P19367 917 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 NTSP30990 170 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 BCL2A1Q16548 175 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 IMPG1Q17R60 797 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 CYP27C1Q4G0S4 372 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 RAET1LQ5VY80 246 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 FAM71E1Q6IPT2 247 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 VWA1Q6PCB0 445 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 CNEP1R1Q8N9A8 125 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 WFDC11Q8NEX6 87 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 ACMSDQ8TDX5 336 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 MZB1Q8WU39 189 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 RTN4RQ9BZR6 473 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 MYNNQ9NPC7 610 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 DDX18Q9NVP1 670 aaKnown RBP10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 MED11Q9P086 117 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 PSMC3IPQ9P2W1 217 aaPredicted RBP10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 TBK1Q9UHD2 729 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 POLR3HQ9Y535 204 aaPredicted RBP10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 ACANP16112 2415 aa10.43□□□□□ -0.74
HMGCS1-204ENST00000507293 UPK1AO00322 258 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 MSTNO14793 375 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 CASKO14936 926 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 SEC14L5O43304 696 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 FADS1O60427 444 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 GLRA3O75311 464 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 SLITRK5O94991 958 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 PSMG1O95456 288 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 FAM153BP0C7A2 387 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 MYL2P10916 166 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 CD53P19397 219 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 RFX3P48380 749 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 SIRPAP78324 504 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 FAM27E3Q08E93 113 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 GANABQ14697 944 aaKnown RBP10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 FAM153CQ494X1 144 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 OR2A2Q6IF42 318 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 ZYG11AQ6WRX3 759 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 FRMD7Q6ZUT3 714 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 IFT20Q8IY31 132 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 OR2L13Q8N349 312 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 MEIOBQ8N635 442 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 OR5M1Q8NGP8 315 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 SMPDL3BQ92485 455 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 FIG4Q92562 907 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 STARD4Q96DR4 205 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 CCDC126Q96EE4 140 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 GLIPR2Q9H4G4 154 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 Q9N2J8 555 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 SDHAF3Q9NRP4 125 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 C6orf203Q9P0P8 240 aaPredicted RBP10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 NDRG3Q9UGV2 375 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 DCDC2Q9UHG0 476 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 GRID1Q9ULK0 1009 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 ABCG2Q9UNQ0 655 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 C19orf53Q9UNZ5 99 aaPredicted RBP10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 EIF3LQ9Y262 564 aaKnown RBP10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 NF1P21359 2839 aa10.42□□□□□ -0.74
HMGCS1-204ENST00000507293 HEATR5AQ86XA9 2040 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 RAI1Q7Z5J4 1906 aaPredicted RBP10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 A0A1W2PPM1 405 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 OR2M5A3KFT3 312 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 G3V2L1 256 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 H0YC42 278 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 H3BML4 177 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 CRCPO75575 148 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 IL33O95760 270 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 CRHP06850 196 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 FOSL1P15407 271 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 CD79BP40259 229 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 SUCLG1P53597 346 aaKnown RBP10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 TPD52P55327 224 aaPredicted RBP10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 CLDN15P56746 228 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 SLC29A2Q14542 456 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 ZNHIT3Q15649 155 aaPredicted RBP10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 DECR1Q16698 335 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 IKBIPQ70UQ0 350 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 TRIM46Q7Z4K8 759 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 BTLAQ7Z6A9 289 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 MARCH3Q86UD3 253 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 KRTAP1-3Q8IUG1 177 aa10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 GSPT2Q8IYD1 628 aaKnown RBP10.41□□□□□ -0.74
HMGCS1-204ENST00000507293 ELP4Q96EB1 424 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms