RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 ADOQ96SZ5 270 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 LMF2Q9BU23 707 aaKnown RBP6.67□□□□□ -1.34
GYPB-206ENST00000506516 DOHHQ9BU89 302 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 CCDC28BQ9BUN5 200 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 ANGPTL4Q9BY76 406 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 TTTY12Q9BZ98 90 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 RASSF4Q9H2L5 321 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 METTL7AQ9H8H3 244 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 LIN7BQ9HAP6 207 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 ZFP64Q9NPA5 681 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 SLCO1B3Q9NPD5 702 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 EQTNQ9NQ60 294 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 DEPPQ9NTK1 212 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 ZCCHC3Q9NUD5 404 aaKnown RBP6.67□□□□□ -1.34
GYPB-206ENST00000506516 AIG1Q9NVV5 245 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 KLRF1Q9NZS2 232 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 NTMQ9P121 344 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 B4GALT7Q9UBV7 327 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 CNOT11Q9UKZ1 510 aaKnown RBP6.67□□□□□ -1.34
GYPB-206ENST00000506516 CBLCQ9ULV8 474 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 FAF1Q9UNN5 650 aaPredicted RBP6.67□□□□□ -1.34
GYPB-206ENST00000506516 PCDHGB3Q9Y5G1 929 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 CHCHD2Q9Y6H1 151 aaPredicted RBP6.67□□□□□ -1.34
GYPB-206ENST00000506516 DOCK10Q96BY6 2186 aa6.67□□□□□ -1.34
GYPB-206ENST00000506516 A0A1B0GUH1 482 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 DUXAA6NLW8 204 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 E9PBE3 544 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 ANKRD28O15084 1053 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 CDC40O60508 579 aaKnown RBP eCLIP6.66□□□□□ -1.34
GYPB-206ENST00000506516 TSPAN2O60636 221 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 UGT2B11O75310 529 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 NME6O75414 186 aaPredicted RBP6.66□□□□□ -1.34
GYPB-206ENST00000506516 GLSO94925 669 aaPredicted RBP6.66□□□□□ -1.34
GYPB-206ENST00000506516 PSMG1O95456 288 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 CPSF4O95639 269 aaKnown RBP6.66□□□□□ -1.34
GYPB-206ENST00000506516 C6orf47O95873 294 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 HMGN2P05204 90 aaKnown RBP6.66□□□□□ -1.34
GYPB-206ENST00000506516 IL6P05231 212 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 PGRP06401 933 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 ALDOCP09972 364 aaKnown RBP6.66□□□□□ -1.34
GYPB-206ENST00000506516 EFNA1P20827 205 aaPredicted RBP6.66□□□□□ -1.34
GYPB-206ENST00000506516 RFC3P40938 356 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 CASP3P42574 277 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 UQCRFS1P47985 274 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 MASP1P48740 699 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 STX1BP61266 288 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 HBA1P69905 142 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 IRX1P78414 480 aaPredicted RBP6.66□□□□□ -1.34
GYPB-206ENST00000506516 PDCD4Q53EL6 469 aaKnown RBP6.66□□□□□ -1.34
GYPB-206ENST00000506516 PRAMEF20Q5VT98 475 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 OR4F3Q6IEY1 312 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 TMEM81Q6P7N7 255 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 SPPL2CQ8IUH8 684 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 MIER2Q8N344 545 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 FAM109AQ8N4B1 249 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 FAM26EQ8N5C1 309 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 TRIML2Q8N7C3 387 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 OR4N2Q8NGD1 307 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 OR56A1Q8NGH5 318 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 OR4A15Q8NGL6 344 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 OR1J4Q8NGS1 313 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 SFXN5Q8TD22 340 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 ADAMTS15Q8TE58 950 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 NUDT8Q8WV74 236 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 JADE3Q92613 823 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 FAM120BQ96EK7 910 aaKnown RBP6.66□□□□□ -1.34
GYPB-206ENST00000506516 CHMP6Q96FZ7 201 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 ZNF597Q96LX8 424 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 RILPQ96NA2 401 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 OR52B2Q96RD2 323 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 OR52E6Q96RD3 313 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 STACQ99469 402 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 SIKE1Q9BRV8 207 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 ACTRT3Q9BYD9 372 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 DEFB127Q9H1M4 99 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 CXorf36Q9H7Y0 433 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 TCF7L2Q9NQB0 619 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 SDHAF3Q9NRP4 125 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 FAM120CQ9NX05 1096 aaKnown RBP6.66□□□□□ -1.34
GYPB-206ENST00000506516 GIN1Q9NXP7 522 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 QPCTLQ9NXS2 382 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 TUBA8Q9NY65 449 aaPredicted RBP6.66□□□□□ -1.34
GYPB-206ENST00000506516 ZIM2Q9NZV7 527 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 BTNL2Q9UIR0 455 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 OSGIN2Q9Y236 505 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 GPR45Q9Y5Y3 372 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 CPAMD8Q8IZJ3 1885 aa6.66□□□□□ -1.34
GYPB-206ENST00000506516 COL6A6A6NMZ7 2263 aa6.65□□□□□ -1.34
GYPB-206ENST00000506516 TLN1Q9Y490 2541 aaKnown RBP6.65□□□□□ -1.34
GYPB-206ENST00000506516 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.65□□□□□ -1.34
GYPB-206ENST00000506516 PINLYPA6NC86 204 aa6.65□□□□□ -1.34
GYPB-206ENST00000506516 PRAMEF25A6NGN4 478 aa6.65□□□□□ -1.34
GYPB-206ENST00000506516 FAM166BA8MTA8 275 aa6.65□□□□□ -1.34
GYPB-206ENST00000506516 PRRG2O14669 202 aa6.65□□□□□ -1.34
GYPB-206ENST00000506516 EDF1O60869 148 aaKnown RBP6.65□□□□□ -1.34
GYPB-206ENST00000506516 ICOSLGO75144 302 aa6.65□□□□□ -1.34
GYPB-206ENST00000506516 TRIM3O75382 744 aaPredicted RBP6.65□□□□□ -1.34
GYPB-206ENST00000506516 CBR3O75828 277 aa6.65□□□□□ -1.34
GYPB-206ENST00000506516 TRAPPC6AO75865 159 aa6.65□□□□□ -1.34
GYPB-206ENST00000506516 SMNDC1O75940 238 aaKnown RBP eCLIP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms